PH01002669G0210's details annotation
1.Annotation
ICBR annotation: histone acetyltransferase HAC1, putative, expressed
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01002669
Strand: +
| Region | Start | End |
| gene | 114360 | 121094 |
| mRNA | 114360 | 121094 |
| exon | 114360 | 116099 |
| exon | 116523 | 116628 |
| exon | 116757 | 116913 |
| exon | 117736 | 117894 |
| exon | 118868 | 121094 |
| CDS | 115957 | 116099 |
| CDS | 116523 | 116628 |
| CDS | 116757 | 116913 |
| CDS | 117736 | 117894 |
| CDS | 118868 | 119052 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000237 | solute:hydrogen antiporter activity, |
| coexpression network | CFinderM000883 | sterol metabolic process, nuclear chromosome, cholestenol delta-isomerase activity, Nitrogen_metabolism Steroid_biosynthesis |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.