CFinderM000066's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen,6.56E-05GO:0016702
lipoxygenase activity,6.56E-05GO:0016165
Linoleic_acid_metabolism0.002435748KEGG
iron ion binding,0.010799447GO:0005506
metal ion binding,0.010799447GO:0046872
oxidation-reduction process,0.020477816GO:0055114
MYB Transcription_Regulator(from PlantTFDB)0.032616523GFam

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000009G0060myb domain protein 33AT5G06100 (2.10E-72)
PH01000121G0990P-loop containing nucleoside triphosphate hydrolases superfamily proteinAT1G64110 (0)
PH01000426G0260lipoxygenase 1AT1G55020 (0.00E+00)
PH01000914G0720lipoxygenase 1AT1G55020 (9.00E-119)
PH01002858G0290Uncharacterized conserved protein (DUF2215)AT5G67610 (3.20E-59)
PH01005448G0090-AT4G11910 (4.30E-35)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000320nicotinate phosphoribosyltransferase activity,
nicotinate-nucleotide diphosphorylase (carboxylating) activity,
adenylylsulfate_kinase_activity
nicotinate nucleotide salvage,
omega_peptidase_activity
SNARE_interactions_in_vesicular_transport
Nicotinate_and_nicotinamide_metabolism
Nitrogen_metabolism
sulfate assimilation,
NAD biosynthetic process,
nucleoside-triphosphatase activity,
metal ion transmembrane transporter activity,
ER to Golgi vesicle-mediated transport,
magnesium_ion_transport
transmembrane transport,
cis-Golgi network,
Golgi membrane,
details
CFinderM000394Endocytosis
Alanine,_aspartate_and_glutamate_metabolism
IMP biosynthetic process,
purine ribonucleotide biosynthetic process,
phosphatidylcholine metabolic process,
RLK-Pelle_RLCK-VI (from iTAK)
Ether_lipid_metabolism
details
CFinderM000588lipid catabolic process,
MYB Transcription_Regulator(from PlantTFDB)
details
CFinderM001010RLK-Pelle_PERK-2 (from iTAK)
ethylene mediated signaling pathway,
endoplasmic reticulum membrane,
Plant_hormone_signal_transduction
protein histidine kinase activity,
Others Transcription_Regulator(from iTAK)
two-component sensor activity,
protein tyrosine kinase activity,
two-component signal transduction system (phosphorelay),
EIL Transcription_Regulator(from PlantTFDB)
two-component response regulator activity,
signal transducer activity,
sulfate assimilation,
details
CFinderM001043lipoxygenase activity,
oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen,
Linoleic_acid_metabolism
iron ion binding,
metal ion binding,
MYB Transcription_Regulator(from PlantTFDB)
details
CFinderM001075SET Transcription_Regulator(from iTAK)
histone_lysine_methylation
Linoleic_acid_metabolism
Lysine_degradation
Cysteine_and_methionine_metabolism
lipoxygenase activity,
histone_binding
histone-lysine N-methyltransferase activity,
oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen,
oxidation-reduction process,
details

4.Expression profilings