|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | Others Transcription_Regulator(from iTAK) | 0.014540458 | GFam | | signal transduction, | 0.038564449 | GO:0007165 |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000172G0970 | XS domain-containing protein / XS zinc finger domain-containing protein-related | AT5G23570 (6.70E-79) | | PH01000385G0640 | - | AT5G02520 (2.90E-15) | | PH01000501G0350 | Protein of unknown function (DUF962) | AT1G18720 (1.80E-34) | | PH01000537G0860 | Rho GTPase activation protein (RhoGAP) with PH domain | AT4G24580 (3.40E-58) | | PH01000537G0870 | Rho GTPase activation protein (RhoGAP) with PH domain | AT4G24580 (4.10E-34) | | PH01002258G0470 | homolog of yeast CDT1 A | AT2G31270 (4.10E-37) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000536 | SET Transcription_Regulator(from iTAK)
Others Transcription_Regulator(from iTAK)
| details | | CFinderM000573 | fatty-acyl-CoA binding,
Others Transcription_Regulator(from iTAK)
signal transduction,
| details | | CFinderM000638 | Phenylalanine,_tyrosine_and_tryptophan_biosynthesis
aromatic amino acid family biosynthetic process,
3-dehydroquinate synthase activity,
B3 Transcription_Regulator(from PlantTFDB)
SNF2 Transcription_Regulator(from iTAK)
Others Transcription_Regulator(from iTAK)
| details | | CFinderM000887 | SWI/SNF-BAF60b Transcription_Regulator(from iTAK)
histone modification,
transcription initiation, DNA-dependent,
| details | | CFinderM000918 | GT48 GlycosylTransferases
RLK-Pelle_RLCK-V (from iTAK)
TKL-Pl-4 (from iTAK)
microtubule cytoskeleton organization,
(1->3)-beta-D-glucan biosynthetic process,
cytokinesis
1,3-beta-D-glucan synthase complex,
mRNA_surveillance_pathway
| details | | CFinderM000953 | fatty-acyl-CoA binding,
| details | | CFinderM001341 | RLK-Pelle_LRR-II (from iTAK)
RLK-Pelle_RLCK-VIIa-2 (from iTAK)
microtubule associated complex,
protein phosphorylation,
microtubule-based movement,
| details | | CFinderM001399 | RNA_transport
Phenylalanine,_tyrosine_and_tryptophan_biosynthesis
3-dehydroquinate synthase activity,
Base_excision_repair
| details | | CFinderM001537 | vacuolar proton-transporting V-type ATPase, V1 domain,
ATP hydrolysis coupled proton transport,
MYB_related Transcription_Regulator(from PlantTFDB)
RLK-Pelle_RLCK-VIIa-2 (from iTAK)
MYB-related Transcription_Regulator(from iTAK)
| details | | CFinderM001752 | spindle pole,
microtubule organizing center,
STE_STE11 (from iTAK)
microtubule cytoskeleton organization,
mRNA_surveillance_pathway
| details |
4.Expression profilings |
