CFinderM000590's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
Ribosome4.99E-05KEGG
translation,0.00010178GO:0006412
structural constituent of ribosome,0.001126995GO:0003735
SNF2 Transcription_Regulator(from iTAK)0.009155108GFam
intracellular,0.010977452GO:0005622
RNA_degradation0.030405325KEGG

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000397G0970transcription regulatorsAT1G02080 (0.00E+00)
PH01000990G0440Ribosomal protein S24e family proteinAT3G04920 (7.70E-56)
PH01001067G0360SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-relatedAT1G50410 (0.00E+00)
PH01001171G0230Ribosomal protein L6 familyAT1G33140 (2.30E-81)
PH01001996G0050Ribosomal protein L35Ae family proteinAT1G74270 (3.10E-52)
PH01003708G0150AAA-type ATPase family proteinAT1G02890 (0.00E+00)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000068cellular protein modification process,
ubiquitin-protein ligase activity,
Ubiquitin_mediated_proteolysis
binding,
intracellular,
protein binding,
CE8 Carbohydrate_Esterases
GH28 Glycoside_Hydrolases
Alfin-like Transcription_Regulator(from iTAK)
SWI/SNF-SWI3 Transcription_Regulator(from iTAK)
TORC1_complex
details
CFinderM000074Ribosome
translation,
structural constituent of ribosome,
intracellular,
details
CFinderM000545binding,
SNF2 Transcription_Regulator(from iTAK)
helicase activity,
ubiquitin-protein ligase activity,
cellular protein modification process,
TOR_signaling
nucleic acid binding,
TORC1_complex
DNA binding,
hydrolase_activity,_acting_on_acid_anhydrides
RNA metabolic process,
RNA_transport
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay,
Ubiquitin_mediated_proteolysis
nucleotide binding,
RNA binding,
ATP binding,
protein binding,
details
CFinderM000732SNF2 Transcription_Regulator(from iTAK)
transferase activity, transferring pentosyl groups,
mRNA_surveillance_pathway
details
CFinderM000838Ribosome
translation,
structural constituent of ribosome,
methylation,
large ribosomal subunit,
intracellular,
nucleobase-containing compound metabolic process,
details
CFinderM001017calcium-dependent cysteine-type endopeptidase activity,
mechanically-gated_ion_channel_activity
RNA_degradation
details
CFinderM001819SNF2 Transcription_Regulator(from iTAK)
cis-Golgi network,
mRNA_surveillance_pathway
details
CFinderM001820mediator complex,
CBM43 Carbohydrate-Binding_Modules
GH17 Glycoside_Hydrolases
details
CFinderM001849SNF2 Transcription_Regulator(from iTAK)
mediator complex,
regulation of transcription from RNA polymerase II promoter,
details

4.Expression profilings