CFinderM000841's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
glutamate biosynthetic process,0.015617431GO:0006537
glutamate synthase activity,0.018338082GO:0015930
oxidoreductase activity, acting on the CH-NH2 group of donors,0.018338082GO:0016638
2 iron, 2 sulfur cluster binding,0.032562844GO:0051537
oxidoreductase activity,0.036460212GO:0016491
bHLH Transcription_Regulator(from PlantTFDB)0.046921837GFam

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000056G0780glutamate synthase 1AT5G04140 (0)
PH01000258G1040-AT4G02920 (4.00E-35)
PH01000397G0940basic helix-loop-helix (bHLH) DNA-binding superfamily proteinAT4G00050 (9.80E-40)
PH01001205G0060Rieske (2Fe-2S) domain-containing proteinAT1G71500 (5.70E-74)
PH01001228G0480alpha/beta-Hydrolases superfamily proteinAT3G48690 (1.30E-60)
PH01002488G0240Uncharacterised protein family (UPF0114)AT4G19390 (4.60E-41)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000287thiamine biosynthetic process,
Pyruvate_metabolism
Carbon_fixation_in_photosynthetic_organisms
iron-sulfur cluster binding,
Zeatin_biosynthesis
Thiamine_metabolism
details

4.Expression profilings