CFinderM000875's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
membrane,0.021612693GO:0016020
cellulose biosynthetic process,0.031371781GO:0030244
cellulose synthase (UDP-forming) activity,0.031629155GO:0016760
acetylglucosaminyltransferase activity,0.031629155GO:0008375
ubiquitin thiolesterase activity,0.031629155GO:0004221
ubiquitin-dependent protein catabolic process,0.037857009GO:0006511

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000134G0160-- (-)
PH01000240G0240Ubiquitin-like superfamily proteinAT4G01000 (3.40E-29)
PH01000441G0190cellulose synthase 1AT4G32410 (0.00E+00)
PH01000855G0460ubiquitin-specific protease 8AT5G22030 (0.00E+00)
PH01002255G0240PDI-like 5-3AT3G20560 (1.80E-82)
PH01004601G0070-- (-)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000016protein phosphorylation,
protein kinase activity,
transferase activity, transferring phosphorus-containing groups,
protein serine/threonine kinase activity,
ATP binding,
RLK-Pelle_LRR-XII-1 (from iTAK)
RLK-Pelle_DLSV (from iTAK)
RLK-Pelle_WAK (from iTAK)
ADP_binding
polysaccharide_binding
transmembrane_transporter_activity
WRKY Transcription_Regulator(from PlantTFDB)
recognition of pollen,
transmembrane transport,
defense response,
RLK-Pelle_L-LEC (from iTAK)
membrane,
integral to membrane,
RLK-Pelle_SD-2b (from iTAK)
RLK-Pelle_WAK_LRK10L-1 (from iTAK)
ATPase activity,
substrate-specific transmembrane transporter activity,
RLK-Pelle_LRR-XI-1 (from iTAK)
6-phosphofructokinase complex,
details
CFinderM000139metabolic process,
transferase activity, transferring hexosyl groups,
cysteine metabolic process,
phenylalanyl-tRNA aminoacylation,
cysteine desulfurase activity,
phenylalanine-tRNA ligase activity,
details
CFinderM000172metabolic process,
cellulose biosynthetic process,
details
CFinderM000876GTPase activity,
GTP binding,
cellulose biosynthetic process,
ubiquitin-dependent protein catabolic process,
cellulose synthase (UDP-forming) activity,
ubiquitin thiolesterase activity,
structural molecule activity,
details
CFinderM000892Valine,_leucine_and_isoleucine_degradation
cellular aldehyde metabolic process,
aldehyde dehydrogenase [NAD(P)+] activity,
details
CFinderM001497COPII vesicle coat,
ER to Golgi vesicle-mediated transport,
Protein_processing_in_endoplasmic_reticulum
signal transducer activity,
ubiquitin thiolesterase activity,
structural molecule activity,
protein binding,
transferase activity, transferring glycosyl groups,
details
CFinderM001626Golgi apparatus,
membrane coat,
clathrin adaptor complex,
Amino_sugar_and_nucleotide_sugar_metabolism
Starch_and_sucrose_metabolism
details
CFinderM001747NAK (from iTAK)
Sulfur_relay_system
Thiamine_metabolism
Golgi apparatus,
cysteine metabolic process,
membrane coat,
clathrin adaptor complex,
cysteine desulfurase activity,
regulation of ARF protein signal transduction,
cytoskeleton organization,
ARF guanyl-nucleotide exchange factor activity,
details
CFinderM001825GT66 GlycosylTransferases
cation:chloride_symporter_activity
oligosaccharyl transferase activity,
spindle pole,
microtubule organizing center,
microtubule cytoskeleton organization,
ion transport,
details
CFinderM001894AGC_NDR (from iTAK)
Golgi apparatus,
membrane coat,
clathrin adaptor complex,
nucleic acid binding,
details

4.Expression profilings