CFinderM001117's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
LSD Transcription_Regulator(from PlantTFDB)0.001968258GFam
C2C2-LSD Transcription_Regulator(from iTAK)0.001968258GFam

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000061G0800-AT5G35080 (3.50E-30)
PH01000273G0530-- (-)
PH01000510G0060acyl-CoA binding protein 4AT3G05420 (6.00E-109)
PH01000771G0560-- (-)
PH01001389G0360-- (-)
PH01003977G0050Tryptophan RNA-binding attenuator protein-likeAT5G47420 (1.50E-57)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000118details
CFinderM000131GT13 GlycosylTransferases
vacuolar_proton-transporting_V-type_ATPase,_V0_domain
Golgi membrane,
proton-transporting V-type ATPase, V0 domain,
details
CFinderM000336C2C2-LSD Transcription_Regulator(from iTAK)
LSD Transcription_Regulator(from PlantTFDB)
cellulose biosynthetic process,
MYB_related Transcription_Regulator(from PlantTFDB)
MYB-related Transcription_Regulator(from iTAK)
details
CFinderM000764RNA-dependent DNA replication,
RNA-directed DNA polymerase activity,
protein import into mitochondrial outer membrane,
vacuolar transport,
mitochondrial outer membrane translocase complex,
retromer complex,
cell communication,
mTERF Transcription_Regulator(from iTAK)
myosin complex,
phosphoric ester hydrolase activity,
phosphatidylinositol binding,
motor activity,
RNA binding,
details
CFinderM001011LSD Transcription_Regulator(from PlantTFDB)
C2C2-LSD Transcription_Regulator(from iTAK)
protein folding,
peptidyl-prolyl cis-trans isomerase activity,
hydrolase_activity,_acting_on_acid_anhydrides
details
CFinderM001070GTnc GlycosylTransferases
checkpoint_clamp_complex
cell_cycle_checkpoint
DNA_damage_checkpoint
cullin-RING ubiquitin ligase complex,
details
CFinderM001085details
CFinderM001115vacuolar_proton-transporting_V-type_ATPase,_V0_domain
proton-transporting V-type ATPase, V0 domain,
ATP hydrolysis coupled proton transport,
MYB_related Transcription_Regulator(from PlantTFDB)
MYB-related Transcription_Regulator(from iTAK)
Oxidative_phosphorylation
Phagosome
details
CFinderM001116protein folding,
MYB_related Transcription_Regulator(from PlantTFDB)
MYB-related Transcription_Regulator(from iTAK)
details
CFinderM001292LSD Transcription_Regulator(from PlantTFDB)
C2C2-LSD Transcription_Regulator(from iTAK)
CAMK_CDPK (from iTAK)
vesicle docking involved in exocytosis,
endoplasmic reticulum,
Protein_processing_in_endoplasmic_reticulum
details
CFinderM001745GT13 GlycosylTransferases
Golgi membrane,
mannosyl-oligosaccharide 1,2-alpha-mannosidase activity,
N-Glycan_biosynthesis
Glycerolipid_metabolism
Various_types_of_N-glycan_biosynthesis
Glycerophospholipid_metabolism
transferase activity, transferring acyl groups,
acetylglucosaminyltransferase activity,
protein glycosylation,
details
CFinderM001851katanin_complex
microtubule_severing
exocyst,
exocytosis,
microtubule binding,
triglyceride lipase activity,
details

4.Expression profilings