CFinderM001188's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
spermine biosynthetic process,0.003934363GO:0006597
spermidine biosynthetic process,0.003934363GO:0008295
adenosylmethionine decarboxylase activity,0.019257797GO:0004014
Cysteine_and_methionine_metabolism0.021532745KEGG
Arginine_and_proline_metabolism0.021532745KEGG

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000020G2300-AT2G43250 (2.00E-138)
PH01000118G1660Adenosylmethionine decarboxylase family proteinAT3G25570 (1.00E-100)
PH01000185G0920-- (-)
PH01000302G0440genomes uncoupled 1AT2G31400 (0.00E+00)
PH01000915G0610AT hook motif DNA-binding family proteinAT2G33620 (9.70E-73)
PH01003018G0190SIGNAL PEPTIDE PEPTIDASE-LIKE 1AT4G33410 (2.00E-161)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000350spermine biosynthetic process,
spermidine biosynthetic process,
adenosylmethionine decarboxylase activity,
NAC Transcription_Regulator(from PlantTFDB)
Arginine_and_proline_metabolism
Cysteine_and_methionine_metabolism
Ubiquitin_mediated_proteolysis
details
CFinderM000351katanin_complex
SAGA-type_complex
details
CFinderM000489SAGA-type_complex
cell death,
details
CFinderM000656RLK-Pelle_RLCK-VIIa-2 (from iTAK)
protein binding,
zinc ion binding,
Protein_processing_in_endoplasmic_reticulum
details
CFinderM001088CBM20 Carbohydrate-Binding_Modules
GH77 Glycoside_Hydrolases
katanin_complex
microtubule_severing
SNF2 Transcription_Regulator(from iTAK)
Starch_and_sucrose_metabolism
4-alpha-glucanotransferase activity,
starch_binding
details
CFinderM001437RLK-Pelle_C-LEC (from iTAK)
RLK-Pelle_RLCK-VIIa-2 (from iTAK)
protein phosphorylation,
details

4.Expression profilings