CFinderM000351's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
katanin_complex0.032691782GO:0008352
SAGA-type_complex0.032691782GO:0070461

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000002G2670NAC domain containing protein 83AT5G13180 (1.60E-29)
PH01000006G1010Concanavalin A-like lectin protein kinase family proteinAT3G53810 (2.50E-51)
PH01000020G2300-AT2G43250 (2.00E-138)
PH01000047G0020CHY-type/CTCHY-type/RING-type Zinc finger proteinAT5G18650 (4.70E-79)
PH01000057G0190-AT2G24530 (2.50E-62)
PH01000088G0470UDP-glucosyl transferase 85A3AT1G22380 (2.00E-119)
PH01000118G1660Adenosylmethionine decarboxylase family proteinAT3G25570 (1.00E-100)
PH01000171G1030Phosphotyrosine protein phosphatases superfamily proteinAT2G35680 (2.00E-67)
PH01000210G0760-AT5G49710 (1.60E-48)
PH01000229G1390AMP-dependent synthetase and ligase family proteinAT5G63380 (7.00E-148)
PH01000266G1270F-box family proteinAT2G32560 (5.90E-84)
PH01000267G1380Transducin/WD40 repeat-like superfamily proteinAT5G23430 (1.00E-149)
PH01000346G0700bromo-adjacent homology (BAH) domain-containing proteinAT5G11470 (2.50E-42)
PH01000473G0440-- (-)
PH01000473G0510nitrilase 4AT5G22300 (2.00E-128)
PH01001261G0490Homeodomain-like superfamily proteinAT3G16350 (2.40E-37)
PH01001678G0250ubiquitin-specific protease 23AT5G57990 (2.20E-65)
PH01002741G0240DHHC-type zinc finger family proteinAT3G60800 (1.00E-118)
PH01003018G0190SIGNAL PEPTIDE PEPTIDASE-LIKE 1AT4G33410 (2.00E-161)
PH01005014G0090-- (-)
PH01005591G0010MATE efflux family proteinAT1G71870 (1.80E-42)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000035ubiquitin-dependent protein catabolic process,
details
CFinderM000246Protein_processing_in_endoplasmic_reticulum
details
CFinderM000253GT47 GlycosylTransferases
sialyltransferase activity,
Mismatch_repair
mismatched DNA binding,
protein glycosylation,
DNA_replication
details
CFinderM000254GNAT Transcription_Regulator(from iTAK)
GT47 GlycosylTransferases
HSF Transcription_Regulator(from PlantTFDB)
details
CFinderM000350spermine biosynthetic process,
spermidine biosynthetic process,
adenosylmethionine decarboxylase activity,
NAC Transcription_Regulator(from PlantTFDB)
Arginine_and_proline_metabolism
Cysteine_and_methionine_metabolism
Ubiquitin_mediated_proteolysis
details
CFinderM000489SAGA-type_complex
cell death,
details
CFinderM000919mRNA_cleavage_factor_complex
mRNA_polyadenylation
phytochelatin biosynthetic process,
response to metal ion,
nitrogen compound metabolic process,
Styrene_degradation
Regulation_of_autophagy
Aminobenzoate_degradation
Tryptophan_metabolism
Cyanoamino_acid_metabolism
glutathione gamma-glutamylcysteinyltransferase activity,
mRNA_binding
Nitrogen_metabolism
C3H Transcription_Regulator(from PlantTFDB)
GNAT Transcription_Regulator(from iTAK)
details
CFinderM001088CBM20 Carbohydrate-Binding_Modules
GH77 Glycoside_Hydrolases
katanin_complex
microtubule_severing
SNF2 Transcription_Regulator(from iTAK)
Starch_and_sucrose_metabolism
4-alpha-glucanotransferase activity,
starch_binding
details
CFinderM001119cysteine-type peptidase activity,
ubiquitin thiolesterase activity,
Protein_processing_in_endoplasmic_reticulum
details
CFinderM001188spermine biosynthetic process,
spermidine biosynthetic process,
adenosylmethionine decarboxylase activity,
Cysteine_and_methionine_metabolism
Arginine_and_proline_metabolism
details
CFinderM001437RLK-Pelle_C-LEC (from iTAK)
RLK-Pelle_RLCK-VIIa-2 (from iTAK)
protein phosphorylation,
details

4.Expression profilings


Show details about module gene expression profiling