CFinderM001236's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
nicotinate-nucleotide diphosphorylase (carboxylating) activity,0.00535106GO:0004514
nicotinate phosphoribosyltransferase activity,0.00535106GO:0004516
NAD biosynthetic process,0.006184019GO:0009435
Endocytosis0.018055548KEGG
protein ubiquitination,0.025142599GO:0016567
ubiquitin ligase complex,0.044732883GO:0000151

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000004G2200F-box/RNI-like superfamily proteinAT1G67190 (6.00E-159)
PH01000267G1150vacuolar protein sorting-associated protein 28 homolog 1AT4G21560 (5.70E-68)
PH01000279G0580-- (-)
PH01000362G0760UBX domain-containing proteinAT4G10790 (1.30E-61)
PH01001266G0620-- (-)
PH01003000G0080nicotinate phosphoribosyltransferase 1AT4G36940 (2.00E-103)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000936NAD biosynthetic process,
phospholipid transport,
nicotinate-nucleotide diphosphorylase (carboxylating) activity,
nicotinate phosphoribosyltransferase activity,
phospholipid-translocating ATPase activity,
details
CFinderM001235ubiquitin ligase complex,
protein ubiquitination,
binding,
Ubiquitin_mediated_proteolysis
RNA_degradation
details
CFinderM001313spliceosomal complex,
aminopeptidase activity,
ubiquitin thiolesterase activity,
nuclear mRNA splicing, via spliceosome,
Spliceosome
details
CFinderM001461HMG Transcription_Regulator(from iTAK)
base-excision repair,
4 iron, 4 sulfur cluster binding,
endonuclease activity,
details
CFinderM001824rRNA modification,
rRNA methyltransferase activity,
rRNA (adenine-N6,N6-)-dimethyltransferase activity,
tRNA aminoacylation,
ligase activity, forming aminoacyl-tRNA and related compounds,
tRNA aminoacylation for protein translation,
details

4.Expression profilings