|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | IWS1 Transcription_Regulator(from iTAK) | 0.002997141 | GFam | | Biotin_metabolism | 0.010113771 | KEGG | | Fatty_acid_biosynthesis | 0.011218222 | KEGG |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000014G0540 | 3-ketoacyl-acyl carrier protein synthase I | AT5G46290 (6.00E-134) | | PH01000332G0960 | Alba DNA/RNA-binding protein | AT1G76010 (1.00E-26) | | PH01000717G0750 | BAH domain ;TFIIS helical bundle-like domain | AT3G48050 (0.00E+00) | | PH01000749G0490 | phosphoinositide binding | AT1G61690 (7.10E-77) | | PH01001189G0100 | Telomerase activating protein Est1 | AT5G19400 (1.20E-97) | | PH01006376G0030 | phosphoinositide binding | AT1G61690 (3.90E-75) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000599 | mRNA_cis_splicing,_via_spliceosome
nuclear_cap_binding_complex
RNA_cap_binding
hydro-lyase activity,
fatty acid biosynthetic process,
Biotin_metabolism
Fatty_acid_biosynthesis
| details | | CFinderM000655 | cell communication,
| details | | CFinderM000798 | nucleosome,
nucleosome assembly,
| details | | CFinderM001635 | Ribosome
translation,
Ribosome
intracellular,
C3H Transcription_Regulator(from PlantTFDB)
| details | | CFinderM001729 | mRNA_surveillance_pathway
CAMTA Transcription_Regulator(from PlantTFDB)
protein binding,
transferase activity, transferring acyl groups,
| details | | CFinderM001819 | SNF2 Transcription_Regulator(from iTAK)
cis-Golgi network,
mRNA_surveillance_pathway
| details | | CFinderM001837 | Ribosome
ribosome biogenesis,
ribonucleoprotein complex,
large ribosomal subunit,
| details | | CFinderM001879 | cis-Golgi network,
| details |
4.Expression profilings |
