|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | Valine,_leucine_and_isoleucine_degradation | 0.001031395 | KEGG | | Valine,_leucine_and_isoleucine_biosynthesis | 0.001031395 | KEGG | | branched chain family amino acid metabolic process, | 0.006186436 | GO:0009081 | | branched-chain-amino-acid transaminase activity, | 0.009373388 | GO:0004084 | | Pantothenate_and_CoA_biosynthesis | 0.009949139 | KEGG |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000180G0820 | RING domain ligase2 | AT5G14420 (5.00E-119) | | PH01001442G0120 | branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5) | AT5G65780 (6.00E-108) | | PH01001914G0200 | - | - (-) | | PH01002028G0330 | B-S glucosidase 44 | AT3G18080 (0.00E+00) | | PH01002110G0070 | Serinc-domain containing serine and sphingolipid biosynthesis protein | AT3G06170 (6.00E-128) | | PH01004502G0120 | Galactose oxidase/kelch repeat superfamily protein | AT1G22040 (4.00E-153) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000697 | Valine,_leucine_and_isoleucine_biosynthesis
Valine,_leucine_and_isoleucine_degradation
| details | | CFinderM000861 | Valine,_leucine_and_isoleucine_degradation
Valine,_leucine_and_isoleucine_biosynthesis
Pantothenate_and_CoA_biosynthesis
branched chain family amino acid metabolic process,
AGC_RSK-2 (from iTAK)
RLK-Pelle_RLCK-VIIa-2 (from iTAK)
iron-sulfur cluster assembly,
branched-chain-amino-acid transaminase activity,
| details | | CFinderM001108 | RLK-Pelle_LRR-XV (from iTAK)
GT77 GlycosylTransferases
C3H Transcription_Regulator(from PlantTFDB)
Phosphatidylinositol_signaling_system
Inositol_phosphate_metabolism
| details | | CFinderM001174 | arsenite transmembrane transporter activity,
arsenite_transport
DNA photolyase activity,
| details | | CFinderM001529 | Fanconi_anaemia_nuclear_complex
DNA repair,
Ubiquitin_mediated_proteolysis
| details | | CFinderM001568 | FAR1 Transcription_Regulator(from PlantTFDB)
RLK-Pelle_LRR-XV (from iTAK)
| details | | CFinderM001587 | Valine,_leucine_and_isoleucine_biosynthesis
Valine,_leucine_and_isoleucine_degradation
nucleoside_diphosphate_phosphorylation
branched chain family amino acid metabolic process,
CTP biosynthetic process,
GTP biosynthetic process,
UTP biosynthetic process,
nucleoside diphosphate kinase activity,
branched-chain-amino-acid transaminase activity,
Pantothenate_and_CoA_biosynthesis
| details | | CFinderM001591 | Valine,_leucine_and_isoleucine_biosynthesis
Valine,_leucine_and_isoleucine_degradation
metabolic process,
branched chain family amino acid metabolic process,
endodeoxyribonuclease activity, producing 5'-phosphomonoesters,
sterol_24-C-methyltransferase_activity
branched-chain-amino-acid transaminase activity,
transferase activity, transferring pentosyl groups,
steroid biosynthetic process,
histidine biosynthetic process,
HB-other Transcription_Regulator(from PlantTFDB)
TALE Transcription_Regulator(from PlantTFDB)
Pantothenate_and_CoA_biosynthesis
Histidine_metabolism
Steroid_biosynthesis
| details | | CFinderM001631 | Pseudo ARR-B Transcription_Regulator(from iTAK)
transaminase activity,
transferase activity, transferring alkyl or aryl (other than methyl) groups,
inorganic diphosphatase activity,
hydrogen-translocating pyrophosphatase activity,
peptidyl-prolyl cis-trans isomerase activity,
two-component response regulator activity,
| details | | CFinderM001657 | Inositol_phosphate_metabolism
Phosphatidylinositol_signaling_system
phosphatidylinositol metabolic process,
Phagosome
cellular protein metabolic process,
phosphatidylinositol phosphate kinase activity,
aspartic-type endopeptidase activity,
GH35 Glycoside_Hydrolases
phospholipid transport,
proteolysis,
metal ion binding,
| details | | CFinderM001699 | Valine,_leucine_and_isoleucine_biosynthesis
Valine,_leucine_and_isoleucine_degradation
HB-other Transcription_Regulator(from PlantTFDB)
TALE Transcription_Regulator(from PlantTFDB)
sterol_24-C-methyltransferase_activity
5S rRNA binding,
endodeoxyribonuclease activity, producing 5'-phosphomonoesters,
branched-chain-amino-acid transaminase activity,
Pantothenate_and_CoA_biosynthesis
Steroid_biosynthesis
steroid biosynthetic process,
branched chain family amino acid metabolic process,
ion transport,
| details | | CFinderM001781 | RLK-Pelle_LRR-XV (from iTAK)
RNA_degradation
copper ion transport,
C3H Transcription_Regulator(from PlantTFDB)
copper-transporting_ATPase_activity
protein binding,
| details | | CFinderM001843 | Valine,_leucine_and_isoleucine_degradation
Valine,_leucine_and_isoleucine_biosynthesis
PLATZ Transcription_Regulator(from iTAK)
protein complex,
microtubule,
TRAF Transcription_Regulator(from iTAK)
branched chain family amino acid metabolic process,
branched-chain-amino-acid transaminase activity,
protein polymerization,
translational initiation,
microtubule-based process,
Pantothenate_and_CoA_biosynthesis
structural constituent of cytoskeleton,
| details |
4.Expression profilings |
