CFinderM001709's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
GH17 Glycoside_Hydrolases0.00505333GFam
Arginine_and_proline_metabolism0.013799105KEGG

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000209G1050aminophospholipid ATPase 1AT5G04930 (0.00E+00)
PH01000326G0530aspartic proteinase A1AT1G11910 (7.00E-177)
PH01001424G0230Glycosyl hydrolase superfamily proteinAT3G46570 (6.20E-83)
PH01001852G0170CTC-interacting domain 7AT2G26280 (2.20E-62)
PH01004459G0060evolutionarily conserved C-terminal region 4AT1G55500 (8.10E-73)
PH01008882G00102-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily proteinAT5G18900 (2.00E-103)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000474CAMK_CAMKL-CHK1 (from iTAK)
eukaryotic translation initiation factor 3 complex,
details
CFinderM000816CMGC_CDK-CRK7-CDK9 (from iTAK)
details
CFinderM000966TKL-Pl-1 (from iTAK)
CMGC_CDK-CRK7-CDK9 (from iTAK)
protein phosphorylation,
chloride transport,
CAMK_CAMKL-CHK1 (from iTAK)
transferase activity, transferring phosphorus-containing groups,
voltage-gated chloride channel activity,
protein kinase activity,
ion channel activity,
ATP binding,
details
CFinderM000967TKL-Pl-1 (from iTAK)
GH17 Glycoside_Hydrolases
phosphate-containing compound metabolic process,
phospholipid transport,
magnesium ion binding,
details
CFinderM000973STE_STE11 (from iTAK)
protein import into nucleus,
RNA_degradation
phospholipid transport,
details
CFinderM001197Ribosome
translation,
G2-like Transcription_Regulator(from PlantTFDB)
GARP-G2-like Transcription_Regulator(from iTAK)
L-ascorbic acid binding,
structural constituent of ribosome,
Arginine_and_proline_metabolism
details
CFinderM001280GH17 Glycoside_Hydrolases
Arginine_and_proline_metabolism
phospholipid transport,
details
CFinderM001281phospholipid transport,
phosphatidylinositol metabolic process,
Inositol_phosphate_metabolism
Phosphatidylinositol_signaling_system
cellular protein metabolic process,
Phagosome
details
CFinderM001431details
CFinderM001462ATP-dependent peptidase activity,
cellular process,
Endocytosis
details
CFinderM001469FAR1 Transcription_Regulator(from PlantTFDB)
CMGC_CDK-CRK7-CDK9 (from iTAK)
RNA_degradation
membrane,
details
CFinderM001513Glycine,_serine_and_threonine_metabolism
GH17 Glycoside_Hydrolases
L-serine biosynthetic process,
phosphoglycerate dehydrogenase activity,
Methane_metabolism
cofactor binding,
details
CFinderM001685ARID Transcription_Regulator(from iTAK)
NAD+ ADP-ribosyltransferase activity,
details
CFinderM001706GH35 Glycoside_Hydrolases
ion transport,
details
CFinderM001751RLK-Pelle_LRR-II (from iTAK)
Arginine_and_proline_metabolism
ion transport,
phospholipid transport,
details
CFinderM001801GH17 Glycoside_Hydrolases
phospholipid transport,
phosphatidylinositol metabolic process,
Inositol_phosphate_metabolism
Phosphatidylinositol_signaling_system
RNA_degradation
Arginine_and_proline_metabolism
Phagosome
details
CFinderM001827ARID Transcription_Regulator(from iTAK)
GH17 Glycoside_Hydrolases
Arginine_and_proline_metabolism
ion transport,
details

4.Expression profilings