CFinderM001827's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
ARID Transcription_Regulator(from iTAK)0.007579996GFam
GH17 Glycoside_Hydrolases0.007579996GFam
Arginine_and_proline_metabolism0.013799105KEGG
ion transport,0.026535114GO:0006811

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01001080G0120ARID/BRIGHT DNA-binding domain-containing proteinAT3G43240 (3.00E-175)
PH01001424G0230Glycosyl hydrolase superfamily proteinAT3G46570 (6.20E-83)
PH01001796G0400cyclic nucleotide gated channel 1AT5G53130 (2.00E-164)
PH01004459G0060evolutionarily conserved C-terminal region 4AT1G55500 (8.10E-73)
PH01005465G0050MEI2-like 3AT4G18120 (2.00E-104)
PH01008882G00102-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily proteinAT5G18900 (2.00E-103)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000607intracellular,
Ribosome
translation,
structural constituent of ribosome,
phosphoribosyl-ATP diphosphatase activity,
ARID Transcription_Regulator(from iTAK)
histidine biosynthetic process,
details
CFinderM000967TKL-Pl-1 (from iTAK)
GH17 Glycoside_Hydrolases
phosphate-containing compound metabolic process,
phospholipid transport,
magnesium ion binding,
details
CFinderM001197Ribosome
translation,
G2-like Transcription_Regulator(from PlantTFDB)
GARP-G2-like Transcription_Regulator(from iTAK)
L-ascorbic acid binding,
structural constituent of ribosome,
Arginine_and_proline_metabolism
details
CFinderM001280GH17 Glycoside_Hydrolases
Arginine_and_proline_metabolism
phospholipid transport,
details
CFinderM001431details
CFinderM001462ATP-dependent peptidase activity,
cellular process,
Endocytosis
details
CFinderM001513Glycine,_serine_and_threonine_metabolism
GH17 Glycoside_Hydrolases
L-serine biosynthetic process,
phosphoglycerate dehydrogenase activity,
Methane_metabolism
cofactor binding,
details
CFinderM001656GH43 Glycoside_Hydrolases
TKL-Pl-6 (from iTAK)
GH35 Glycoside_Hydrolases
Inositol_phosphate_metabolism
Phosphatidylinositol_signaling_system
details
CFinderM001685ARID Transcription_Regulator(from iTAK)
NAD+ ADP-ribosyltransferase activity,
details
CFinderM001699Valine,_leucine_and_isoleucine_biosynthesis
Valine,_leucine_and_isoleucine_degradation
HB-other Transcription_Regulator(from PlantTFDB)
TALE Transcription_Regulator(from PlantTFDB)
sterol_24-C-methyltransferase_activity
5S rRNA binding,
endodeoxyribonuclease activity, producing 5'-phosphomonoesters,
branched-chain-amino-acid transaminase activity,
Pantothenate_and_CoA_biosynthesis
Steroid_biosynthesis
steroid biosynthetic process,
branched chain family amino acid metabolic process,
ion transport,
details
CFinderM001706GH35 Glycoside_Hydrolases
ion transport,
details
CFinderM001709GH17 Glycoside_Hydrolases
Arginine_and_proline_metabolism
details
CFinderM001751RLK-Pelle_LRR-II (from iTAK)
Arginine_and_proline_metabolism
ion transport,
phospholipid transport,
details
CFinderM001801GH17 Glycoside_Hydrolases
phospholipid transport,
phosphatidylinositol metabolic process,
Inositol_phosphate_metabolism
Phosphatidylinositol_signaling_system
RNA_degradation
Arginine_and_proline_metabolism
Phagosome
details
CFinderM001828ARID Transcription_Regulator(from iTAK)
ion transport,
intracellular,
details

4.Expression profilings