CFinderM001896's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
seryl-tRNA aminoacylation,0.004124935GO:0006434
serine-tRNA ligase activity,0.006806143GO:0004828
5S rRNA binding,0.006806143GO:0008097
Aminoacyl-tRNA_biosynthesis0.033044667KEGG
tRNA aminoacylation for protein translation,0.035397339GO:0006418

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000026G1530MAK10 homologueAT2G11000 (1.00E-115)
PH01000244G0520ribosomal protein L5AT3G25520 (2.00E-128)
PH01000325G0810time for coffeeAT3G22380 (3.60E-76)
PH01000718G0270seryl-tRNA synthetase / serine--tRNA ligaseAT5G27470 (9.00E-178)
PH01001331G0320nucleotide binding;protein bindingAT4G28450 (0.00E+00)
PH01002725G0180Uncharacterised conserved protein (UCP012943)AT5G54540 (4.80E-22)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000697Valine,_leucine_and_isoleucine_biosynthesis
Valine,_leucine_and_isoleucine_degradation
details
CFinderM000747microtubule,
protein complex,
microtubule-based process,
protein polymerization,
details
CFinderM000905Sulfur_relay_system
details
CFinderM001054seryl-tRNA aminoacylation,
electron transport chain,
bZIP Transcription_Regulator(from PlantTFDB)
serine-tRNA ligase activity,
RNA metabolic process,
details
CFinderM001111vacuolar proton-transporting V-type ATPase, V1 domain,
C2C2-Dof Transcription_Regulator(from iTAK)
Dof Transcription_Regulator(from PlantTFDB)
binding,
proton-transporting ATPase activity, rotational mechanism,
ATP hydrolysis coupled proton transport,
details
CFinderM001252SET Transcription_Regulator(from iTAK)
eukaryotic translation initiation factor 3 complex,
RNA_transport
protein binding,
details
CFinderM001553seryl-tRNA aminoacylation,
serine-tRNA ligase activity,
Regulation_of_autophagy
tRNA aminoacylation for protein translation,
ribonuclease activity,
Aminoacyl-tRNA_biosynthesis
details
CFinderM001593vacuolar proton-transporting V-type ATPase, V1 domain,
ATP hydrolysis coupled proton transport,
proton-transporting ATPase activity, rotational mechanism,
binding,
details
CFinderM001699Valine,_leucine_and_isoleucine_biosynthesis
Valine,_leucine_and_isoleucine_degradation
HB-other Transcription_Regulator(from PlantTFDB)
TALE Transcription_Regulator(from PlantTFDB)
sterol_24-C-methyltransferase_activity
5S rRNA binding,
endodeoxyribonuclease activity, producing 5'-phosphomonoesters,
branched-chain-amino-acid transaminase activity,
Pantothenate_and_CoA_biosynthesis
Steroid_biosynthesis
steroid biosynthetic process,
branched chain family amino acid metabolic process,
ion transport,
details

4.Expression profilings