CFinderADM000931's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| carboxylic acid biosynthetic process | 6.91E-06 | GO:0046394 |
| shikimate metabolic process | 2.42E-05 | GO:0019632 |
| shikimate kinase activity | 3.45E-05 | GO:0004765 |
| aromatic amino acid family biosynthetic process | 5.98E-05 | GO:0009073 |
| apigenin glycosides biosynthesis | 7.70E-05 | plantCyc |
| chorismate biosynthesis from 3-dehydroquinate | 7.70E-05 | plantCyc |
| genistin gentiobioside biosynthesis | 7.70E-05 | plantCyc |
| luteolin glycosides biosynthesis | 7.70E-05 | plantCyc |
| myricetin gentiobioside biosynthesis | 7.70E-05 | plantCyc |
| kaempferol gentiobioside biosynthesis | 8.64E-05 | plantCyc |
| sesaminol glucoside biosynthesis | 0.000326981 | plantCyc |
| curcumin glucoside biosynthesis | 0.000365865 | plantCyc |
| quercetin gentiotetraside biosynthesis | 0.000615277 | plantCyc |
| Biosynthesis of amino acids | 0.001037518 | KEGG pathway |
| flavonoid glucuronidation | 0.001482074 | GO:0052696 |
| flavonoid biosynthetic process | 0.001482074 | GO:0009813 |
| quercetin 3-O-glucosyltransferase activity | 0.001994243 | GO:0080043 |
| quercetin 7-O-glucosyltransferase activity | 0.001994243 | GO:0080044 |
| magnesium ion binding | 0.002861463 | GO:0000287 |
| plastid | 0.00294285 | GO:0009536 |
| intracellular membrane-bounded organelle | 0.00518649 | GO:0043231 |
| formation of glycosidic bonds, GlycosylTransferases: GTnc | 0.006837609 | cazy family |
| nucleotide binding | 0.02889556 | GO:0000166 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T013371 | - | - |
| CRO_T024111 | - | - |
| CRO_T027370 | AT4G39540 (3.00E-85) | SK2|shikimate kinase 2 |
| CRO_T027640 | AT2G15760 (1.00E-30) | Protein of unknown function (DUF1645) |
| CRO_T030979 | AT5G49690 (3.00E-48) | UDP-Glycosyltransferase superfamily protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000365 | defense response U1 snRNA 3'-end processing U5 snRNA 3'-end processing nuclear polyadenylation-dependent mRNA catabolic process exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay nuclear polyadenylation-dependent tRNA catabolic process nuclear polyadenylation-dependent rRNA catabolic process exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) nuclear mRNA surveillance AU-rich element binding U4 snRNA 3'-end processing nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5' salidroside biosynthesis apigenin glycosides biosynthesis genistin gentiobioside biosynthesis luteolin glycosides biosynthesis myricetin gentiobioside biosynthesis kaempferol gentiobioside biosynthesis formation of glycosidic bonds, GlycosylTransferases: GTnc nuclear exosome (RNase complex) cytoplasmic exosome (RNase complex) sesaminol glucoside biosynthesis response to biotic stimulus curcumin glucoside biosynthesis hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc quercetin gentiotetraside biosynthesis vindoline and vinblastine biosynthesis NADH dehydrogenase (ubiquinone) activity quercetin 7-O-glucosyltransferase activity quercetin 3-O-glucosyltransferase activity transferase activity, transferring acyl groups flavonoid glucuronidation flavonoid biosynthetic process RNA degradation transferase activity, transferring glycosyl groups Plant hormone signal transduction vacuole | details |
| CFinderADM001650 | succinate transmembrane transport carboxylic acid biosynthetic process succinate transmembrane transporter activity chorismate biosynthesis from 3-dehydroquinate shikimate metabolic process shikimate kinase activity activation of GTPase activity aromatic amino acid family biosynthetic process regulation of vesicle fusion voltage-gated anion channel activity Calcium signaling pathway regulation of anion transmembrane transport Rab GTPase binding stromule mitochondrial outer membrane chloroplast outer membrane GTPase activator activity formation of glycosidic bonds, GlycosylTransferases: GTnc Biosynthesis of amino acids endomembrane system integral component of membrane plastid intracellular protein transport magnesium ion binding intracellular transmembrane transport translation heme binding structural constituent of ribosome | details |
Expression profiles
 Show details about module gene expression profiling |