CFinderADM001650's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| succinate transmembrane transport | 1.71E-05 | GO:0071422 |
| carboxylic acid biosynthetic process | 1.71E-05 | GO:0046394 |
| succinate transmembrane transporter activity | 3.43E-05 | GO:0015141 |
| chorismate biosynthesis from 3-dehydroquinate | 3.71E-05 | plantCyc |
| shikimate metabolic process | 7.99E-05 | GO:0019632 |
| shikimate kinase activity | 8.57E-05 | GO:0004765 |
| activation of GTPase activity | 0.000148259 | GO:0090630 |
| aromatic amino acid family biosynthetic process | 0.000148259 | GO:0009073 |
| regulation of vesicle fusion | 0.000148259 | GO:0031338 |
| voltage-gated anion channel activity | 0.000171189 | GO:0008308 |
| Calcium signaling pathway | 0.000179459 | KEGG pathway |
| regulation of anion transmembrane transport | 0.000221364 | GO:1903959 |
| Rab GTPase binding | 0.000341893 | GO:0017137 |
| stromule | 0.000398568 | GO:0010319 |
| mitochondrial outer membrane | 0.000398568 | GO:0005741 |
| chloroplast outer membrane | 0.000398568 | GO:0009707 |
| GTPase activator activity | 0.001056116 | GO:0005096 |
| formation of glycosidic bonds, GlycosylTransferases: GTnc | 0.001300281 | cazy family |
| Biosynthesis of amino acids | 0.002892084 | KEGG pathway |
| endomembrane system | 0.005121718 | GO:0012505 |
| integral component of membrane | 0.00593532 | GO:0016021 |
| plastid | 0.007430957 | GO:0009536 |
| intracellular protein transport | 0.007551219 | GO:0006886 |
| magnesium ion binding | 0.008058201 | GO:0000287 |
| intracellular | 0.02369338 | GO:0005622 |
| transmembrane transport | 0.026502845 | GO:0055085 |
| translation | 0.030141124 | GO:0006412 |
| heme binding | 0.039064949 | GO:0020037 |
| structural constituent of ribosome | 0.046272642 | GO:0003735 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T003465 | AT2G26360 (9.00E-11) | Mitochondrial substrate carrier family protein |
| CRO_T025403 | AT1G60660 (2.00E-16) | ATCB5LP|ARABIDOPSIS CYTOCHROME B5-LIKE PROTEIN; CB5LP|cytochrome B5-like protein |
| CRO_T025560 | AT1G79260 (1.00E-52) | |
| CRO_T025968 | AT4G18530 (3.00E-99) | Protein of unknown function (DUF707) |
| CRO_T027370 | AT4G39540 (3.00E-85) | SK2|shikimate kinase 2 |
| CRO_T029736 | AT5G57490 (8.00E-99) | ATVDAC4|VOLTAGE DEPENDENT ANION CHANNEL 4 |
| CRO_T030397 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000931 | carboxylic acid biosynthetic process shikimate metabolic process shikimate kinase activity aromatic amino acid family biosynthetic process apigenin glycosides biosynthesis chorismate biosynthesis from 3-dehydroquinate genistin gentiobioside biosynthesis luteolin glycosides biosynthesis myricetin gentiobioside biosynthesis kaempferol gentiobioside biosynthesis sesaminol glucoside biosynthesis curcumin glucoside biosynthesis quercetin gentiotetraside biosynthesis Biosynthesis of amino acids flavonoid glucuronidation flavonoid biosynthetic process quercetin 3-O-glucosyltransferase activity quercetin 7-O-glucosyltransferase activity magnesium ion binding plastid intracellular membrane-bounded organelle formation of glycosidic bonds, GlycosylTransferases: GTnc nucleotide binding | details |
| CFinderADM001004 | negative regulation of programmed cell death protein transmembrane transport protein localization to organelle reproductive structure development Sulfur metabolism photosynthesis light reactions single organism reproductive process post-embryonic development Protein_kinases_phosphatases, PPC:4.2.6: IRE/NPH/PI dependent/S6 Kinase protein channel activity Transcription_related, Transcription factor: FAR1 Ubiquitin mediated proteolysis intracellular signal transduction respiratory chain protein binding electron carrier activity | details |
Expression profiles
 Show details about module gene expression profiling |