CFinderADM001023's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Phospholipase D signaling pathway | 2.36E-06 | KEGG pathway |
| aspartic endopeptidase activity, intramembrane cleaving | 1.15E-05 | GO:0042500 |
| integral component of cytoplasmic side of endoplasmic reticulum membrane | 1.19E-05 | GO:0071458 |
| Golgi-associated vesicle membrane | 1.19E-05 | GO:0030660 |
| integral component of lumenal side of endoplasmic reticulum membrane | 1.19E-05 | GO:0071556 |
| homoserine dehydrogenase activity | 1.62E-05 | GO:0004412 |
| lysosomal membrane | 1.88E-05 | GO:0005765 |
| membrane protein proteolysis | 3.58E-05 | GO:0033619 |
| threonine biosynthetic process | 3.75E-05 | GO:0009088 |
| isoleucine biosynthetic process | 4.02E-05 | GO:0009097 |
| methionine biosynthetic process | 4.02E-05 | GO:0009086 |
| signal peptide processing | 6.50E-05 | GO:0006465 |
| small GTPase mediated signal transduction | 0.001344387 | GO:0007264 |
| endosome | 0.003363022 | GO:0005768 |
| GTP binding | 0.003384978 | GO:0005525 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T018782 | - | - |
| CRO_T022196 | AT2G15310 (7.00E-15) | ARFB1A|ADP-ribosylation factor B1A |
| CRO_T027199 | - | - |
| CRO_T028829 | - | - |
| CRO_T032980 | AT4G33410 (3.00E-21) | ATSPPL1|SIGNAL PEPTIDE PEPTIDASE-LIKE 1 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000322 | adenine and adenosine salvage II amine transport callose deposition in cell wall adenine salvage taurine-transporting ATPase activity adenine phosphoribosyltransferase activity (1->3)-beta-D-glucan binding Purine metabolism acylglycerol lipase activity ribonuclease T2 activity phospholipase activity protein histidine kinase activity xenobiotic-transporting ATPase activity xenobiotic transport nucleoside metabolic process ribonucleoside binding ABC transporters peptidyl-histidine phosphorylation cell surface receptor signaling pathway lipid catabolic process response to heat chloroplast outer membrane RNA phosphodiester bond hydrolysis, endonucleolytic chloroplast organization DNA-directed RNA polymerase activity Protein_kinases_phosphatases, PPC:1.12.4: Leucine Rich Repeat Kinase XI & XII drug transmembrane transport polysaccharide binding | details |
| CFinderADM000757 | Phospholipase D signaling pathway nuclear polyadenylation-dependent ncRNA catabolic process snRNA 3'-end processing rRNA metabolic process Golgi-associated vesicle membrane integral component of cytoplasmic side of endoplasmic reticulum membrane integral component of lumenal side of endoplasmic reticulum membrane exosome (RNase complex) aspartic endopeptidase activity, intramembrane cleaving lysosomal membrane homoserine dehydrogenase activity membrane protein proteolysis nuclear-transcribed mRNA catabolic process, exonucleolytic threonine biosynthetic process isoleucine biosynthetic process methionine biosynthetic process signal peptide processing RNA degradation nucleic acid phosphodiester bond hydrolysis small GTPase mediated signal transduction endosome GTP binding cytosol | details |
| CFinderADM001270 | protein targeting glucose catabolic process membrane protein proteolysis integral component of lumenal side of endoplasmic reticulum membrane integral component of cytoplasmic side of endoplasmic reticulum membrane Golgi-associated vesicle membrane Protein_kinases_phosphatases, PPC:1.12.3: Leucine Rich Repeat Kinase VII lysosomal membrane Transcriptional misregulation in cancers aspartic endopeptidase activity, intramembrane cleaving signal peptide processing transmembrane receptor protein tyrosine kinase activity adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 nucleosome peptidyl-tyrosine phosphorylation polysaccharide binding protein heterodimerization activity 2-alkenal reductase [NAD(P)] activity endosome integral component of membrane DNA binding | details |
| CFinderADM001428 | details | |
| CFinderADM001452 | cellular process transferase activity, transferring glycosyl groups | details |
| CFinderADM001604 | details |
Expression profiles
 Show details about module gene expression profiling |