CFinderADM001270's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| protein targeting | 1.46E-05 | GO:0006605 |
| glucose catabolic process | 1.46E-05 | GO:0006007 |
| membrane protein proteolysis | 1.46E-05 | GO:0033619 |
| integral component of lumenal side of endoplasmic reticulum membrane | 1.65E-05 | GO:0071556 |
| integral component of cytoplasmic side of endoplasmic reticulum membrane | 1.65E-05 | GO:0071458 |
| Golgi-associated vesicle membrane | 1.65E-05 | GO:0030660 |
| Protein_kinases_phosphatases, PPC:1.12.3: Leucine Rich Repeat Kinase VII | 1.83E-05 | kinase family |
| lysosomal membrane | 2.59E-05 | GO:0005765 |
| Transcriptional misregulation in cancers | 2.82E-05 | KEGG pathway |
| aspartic endopeptidase activity, intramembrane cleaving | 3.58E-05 | GO:0042500 |
| signal peptide processing | 6.65E-05 | GO:0006465 |
| transmembrane receptor protein tyrosine kinase activity | 8.04E-05 | GO:0004714 |
| adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 | 0.000307769 | cazy family |
| nucleosome | 0.000519631 | GO:0000786 |
| peptidyl-tyrosine phosphorylation | 0.000550121 | GO:0018108 |
| polysaccharide binding | 0.001842174 | GO:0030247 |
| protein heterodimerization activity | 0.001842174 | GO:0046982 |
| 2-alkenal reductase [NAD(P)] activity | 0.002069235 | GO:0032440 |
| endosome | 0.004131333 | GO:0005768 |
| integral component of membrane | 0.031466783 | GO:0016021 |
| DNA binding | 0.048389635 | GO:0003677 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T004913 | AT3G28040 (0) | Leucine-rich receptor-like protein kinase family protein |
| CRO_T011200 | AT4G17616 (7.00E-25) | Pentatricopeptide repeat (PPR) superfamily protein |
| CRO_T014558 | AT4G40030 (1.00E-74) | H3.3|histone 3.3 |
| CRO_T021281 | AT3G24150 (6.00E-51) | unknown protein |
| CRO_T032980 | AT4G33410 (3.00E-21) | ATSPPL1|SIGNAL PEPTIDE PEPTIDASE-LIKE 1 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000701 | glucose catabolic process protein targeting cellular aldehyde metabolic process benzoate biosynthesis III (CoA-dependent, non-β-oxidative) fatty acid α-oxidation I Transcriptional misregulation in cancers aldehyde dehydrogenase [NAD(P)+] activity formation of glycosidic bonds, GlycosylTransferases: GTnc aldehyde dehydrogenase (NAD) activity cellulose synthase (UDP-forming) activity cellulose biosynthetic process nucleosome protein heterodimerization activity cell wall organization | details |
| CFinderADM000757 | Phospholipase D signaling pathway nuclear polyadenylation-dependent ncRNA catabolic process snRNA 3'-end processing rRNA metabolic process Golgi-associated vesicle membrane integral component of cytoplasmic side of endoplasmic reticulum membrane integral component of lumenal side of endoplasmic reticulum membrane exosome (RNase complex) aspartic endopeptidase activity, intramembrane cleaving lysosomal membrane homoserine dehydrogenase activity membrane protein proteolysis nuclear-transcribed mRNA catabolic process, exonucleolytic threonine biosynthetic process isoleucine biosynthetic process methionine biosynthetic process signal peptide processing RNA degradation nucleic acid phosphodiester bond hydrolysis small GTPase mediated signal transduction endosome GTP binding cytosol | details |
| CFinderADM000881 | nuclear polyadenylation-dependent ncRNA catabolic process snRNA 3'-end processing rRNA metabolic process exosome (RNase complex) nuclear-transcribed mRNA catabolic process, exonucleolytic Protein_kinases_phosphatases, PPC:1.12.3: Leucine Rich Repeat Kinase VII transmembrane receptor protein tyrosine kinase activity glucan endo-1,3-beta-D-glucosidase activity adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc RNA degradation peptidyl-tyrosine phosphorylation nucleic acid phosphodiester bond hydrolysis polysaccharide binding 2-alkenal reductase [NAD(P)] activity anchored component of plasma membrane carbohydrate metabolic process | details |
| CFinderADM000902 | membrane lipid catabolic process protein targeting glucose catabolic process phosphatidylcholine metabolic process calcium ion binding biotin biosynthesis from 8-amino-7-oxononanoate I N-acylphosphatidylethanolamine-specific phospholipase D activity phospholipase D activity choline biosynthesis III MAPK signaling pathway Transcriptional misregulation in cancers adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 phosphatidate metabolism, as a signaling molecule phospholipases response to water deprivation Glycerophospholipid metabolism response to salt stress 2 iron, 2 sulfur cluster binding nucleotidyltransferase activity nucleosome response to abscisic acid protein heterodimerization activity polysaccharide binding electron carrier activity membrane | details |
| CFinderADM001023 | Phospholipase D signaling pathway aspartic endopeptidase activity, intramembrane cleaving integral component of cytoplasmic side of endoplasmic reticulum membrane Golgi-associated vesicle membrane integral component of lumenal side of endoplasmic reticulum membrane homoserine dehydrogenase activity lysosomal membrane membrane protein proteolysis threonine biosynthetic process isoleucine biosynthetic process methionine biosynthetic process signal peptide processing small GTPase mediated signal transduction endosome GTP binding | details |
| CFinderADM001137 | glucose catabolic process protein targeting biotin biosynthesis from 8-amino-7-oxononanoate I cardiolipin biosynthesis II phosphatidylglycerol biosynthesis I (plastidic) phosphatidylglycerol biosynthesis II (non-plastidic) MAPK signaling pathway Transcriptional misregulation in cancers nucleosome 2 iron, 2 sulfur cluster binding protein heterodimerization activity electron carrier activity Protein processing in endoplasmic reticulum endoplasmic reticulum membrane calcium ion binding | details |
| CFinderADM001167 | trans-Golgi network endosome protein targeting glucose catabolic process phosphatidylcholine biosynthesis III phosphatidylcholine biosynthesis IV phosphatidylcholine biosynthesis II Transcriptional misregulation in cancers choline biosynthesis I nucleosome formation of glycosidic bonds, GlycosylTransferases: GTnc S-adenosylmethionine-dependent methyltransferase activity protein heterodimerization activity plant-type cell wall vacuolar membrane methylation integral component of membrane DNA binding | details |
| CFinderADM001174 | glucose catabolic process protein targeting RIG-I-like receptor signaling pathway spindle assembly Transcriptional misregulation in cancers microtubule minus-end binding thiol-dependent ubiquitin-specific protease activity spindle microtubule HAUS complex protein deubiquitination Ubiquitin_Proteasome_system, DUB: OTU nucleosome formation of glycosidic bonds, GlycosylTransferases: GTnc protein heterodimerization activity trans-Golgi network endosome | details |
| CFinderADM001453 | protein targeting glucose catabolic process Autophagy - animal Transcriptional misregulation in cancers nucleosome protein heterodimerization activity DNA binding | details |
| CFinderADM001588 | protein targeting glucose catabolic process Transcriptional misregulation in cancers nucleosome protein heterodimerization activity Protein processing in endoplasmic reticulum endoplasmic reticulum membrane DNA binding | details |
Expression profiles
 Show details about module gene expression profiling |