CFinderADM001273's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| potassium ion transmembrane transporter activity | 2.82E-05 | GO:0015079 |
| potassium ion transmembrane transport | 0.000116404 | GO:0071805 |
| Transcription_related, Transcription factor: MYB-related | 0.000533805 | TF family |
| Ubiquitin_Proteasome_system, E3 adaptor: F-box | 0.007086269 | ubs family |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T002747 | AT1G01520 (9.00E-21) | ASG4|ALTERED SEED GERMINATION 4 |
| CRO_T009549 | AT2G17080 (3.00E-34) | Arabidopsis protein of unknown function (DUF241) |
| CRO_T011549 | AT1G12820 (0) | AFB3|auxin signaling F-box 3 |
| CRO_T021969 | AT1G60160 (0) | Potassium transporter family protein |
| CRO_T027249 | AT4G28840 (2.00E-11) | TIE1|TCP Interactor containing EAR motif protein 1 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM001227 | response to far red light positive regulation of circadian rhythm Circadian rhythm red, far-red light phototransduction biological regulation Protein_kinases_phosphatases, PPC:4.4.1: Unknown Function Kinase Transcription_related, Transcription factor: G2-like positive regulation of transcription, DNA-templated Transcription_related, Transcription factor: bHLH Transcription_related, Transcription factor: FAR1 transcription factor activity, sequence-specific DNA binding | details |
| CFinderADM001341 | DNA synthesis involved in DNA repair delta DNA polymerase complex box C/D snoRNP complex rRNA modification cell proliferation DNA-dependent DNA replication snoRNA binding DNA-directed DNA polymerase activity transcription coactivator activity leaf development Transcription_related, Transcription factor: B3 small-subunit processome protein binding Ribosome biogenesis in eukaryotes Purine metabolism Ubiquitin_Proteasome_system, E3 adaptor: F-box transcription, DNA-templated | details |
| CFinderADM001981 | Betalain biosynthesis L-ornithine transmembrane transporter activity oxidoreductase activity, acting on single donors with incorporation of molecular oxygen L-histidine transmembrane transporter activity arginine transmembrane transporter activity L-histidine transmembrane transport arginine transmembrane transport L-ornithine transmembrane transport cellular aromatic compound metabolic process L-lysine transmembrane transport L-arginine import proline biosynthetic process ornithine-citrulline shuttle L-lysine transmembrane transporter activity calcium-dependent cysteine-type endopeptidase activity ferrous iron binding Transcription_related, Transcription regulator: SET carbohydrate binding dioxygenase activity Ubiquitin_Proteasome_system, E3 adaptor: F-box proteolysis translation structural constituent of ribosome | details |
| CFinderADM002107 | Ubiquitin_Proteasome_system, E3 adaptor: F-box | details |
| CFinderADM002150 | Cytochrome_P450, Cytochrome P450: CYP701A ent-kaur-16-en-19-ol oxidase activity ent-kaurene oxidase activity ent-kaur-16-en-19-al oxidase activity ent-kaurene oxidation to kaurenoic acid GA12 biosynthesis gibberellin biosynthetic process NOD-like receptor signaling pathway Diterpenoid biosynthesis chloroplast outer membrane Transcription_related, Transcription factor: TCP ATP-dependent peptidase activity single-organism cellular process cell division metalloendopeptidase activity defense response formation of glycosidic bonds, GlycosylTransferases: GTnc endoplasmic reticulum chloroplast envelope proteolysis iron ion binding heme binding | details |
| CFinderADM002249 | kinetochore assembly protein localization to kinetochore mitotic sister chromatid segregation nuclear MIS12/MIND complex CCR4-NOT core complex negative regulation of translation nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay cytoplasmic mRNA processing body Transcription_related, Transcription factor: MYB-related RNA degradation regulation of transcription, DNA-templated | details |
Expression profiles
 Show details about module gene expression profiling |