CFinderADM001431's detailed annotation
Protein:
Yellow color--query protein
Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein
Blue--proteins own interaction and negative co-expression relationship with target protein
Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
myricetin 3'-O-methyltransferase activity6.92E-05GO:0033799
11-O-demethyl-17-O-deacetylvindoline O-methyltransferase activity6.92E-05GO:0030766
Stilbenoid, diarylheptanoid and gingerol biosynthesis 7.05E-05KEGG pathway
aromatic compound biosynthetic process0.000201978GO:0019438
alkaloid biosynthetic process0.000201978GO:0009821
syringetin biosynthesis0.000457857plantCyc
phenylpropanoids methylation (ice plant)0.000518175plantCyc
protein homodimerization activity0.000768886GO:0042803
methylation0.005770626GO:0032259

Module member annotation

Gene IDOrtholog in Arabidopsis (Blast E-value)Annotation in Arabidopsis
CRO_T006414AT5G09570 (1.00E-32)Cox19-like CHCH family protein
CRO_T007007AT1G73875 (2.00E-26)DNAse I-like superfamily protein
CRO_T019314AT5G54160 (4.00E-45)ATOMT1|O-methyltransferase 1; COMT1|caffeate O-methyltransferase 1
CRO_T021652AT5G47120 (6.00E-78)ATBI-1|ARABIDOPSIS BAX INHIBITOR 1; ATBI1|BAX inhibitor 1
CRO_T023306AT5G16420 (1.00E-22)Pentatricopeptide repeat (PPR-like) superfamily protein

Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderADM000002Transcription_related, Transcription factor: M-type
phosphatidylethanolamine binding
L-alanine biosynthesis III
nickel cation binding
photoperiodism, flowering
molybdenum cofactor biosynthesis
transferase activity, transferring alkyl or aryl (other than methyl) groups
regulation of flower development
nitrogen compound metabolic process
Circadian rhythm - plant
Transcription_related, Transcription factor: G2-like
transferase activity, transferring hexosyl groups
Transcription_related, Transcription factor: MYB-related
DNA-directed RNA polymerase activity
Terpenoid backbone biosynthesis
Transcription_related, Transcription factor: B3
multicellular organism development
Transcription_related, Transcription factor: NAC
binding
Transcription_related, Transcription factor: FAR1
transcription, DNA-templated
GTPase activity
Purine metabolism
details
CFinderADM000711Influenza A
uroporphyrinogen-III synthase activity
UDP-galactose transmembrane transporter activity
formamidase activity
UDP-glucose transmembrane transporter activity
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
root hair cell development
UDP-galactose transmembrane transport
production of miRNAs involved in gene silencing by miRNA
aging
histone H4-K5 acetylation
regulation of timing of transition from vegetative to reproductive phase
ncRNA processing
lateral root development
tetrapyrrole biosynthetic process
UDP-glucose transport
NuA4 histone acetyltransferase complex
nuclear pore inner ring
nuclear pore organization
shoot system development
reproductive structure development
protein import into nucleus, docking
Carbon metabolism
Stilbenoid, diarylheptanoid and gingerol biosynthesis
structural constituent of nuclear pore
myricetin 3'-O-methyltransferase activity
11-O-demethyl-17-O-deacetylvindoline O-methyltransferase activity
single organism reproductive process
regulation of flower development
alkaloid biosynthetic process
cytokinins 7-N-glucoside biosynthesis
cytokinins 9-N-glucoside biosynthesis
aromatic compound biosynthetic process
cellular response to oxidative stress
sulfate assimilation
oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
Transcription_related, Transcription factor: PLATZ
quercetin glucoside biosynthesis (Allium)
Protein_kinases_phosphatases, PPC:4.2.4: SNF1 Related Protein Kinase (SnRK)
Transcription_related, Transcription regulator: PHD
Ubiquitin_Proteasome_system, E3: RING
syringetin biosynthesis
quercetin gentiotetraside biosynthesis
phenylpropanoids methylation (ice plant)
protein disulfide oxidoreductase activity
protein homodimerization activity
quercetin 7-O-glucosyltransferase activity
quercetin 3-O-glucosyltransferase activity
cell redox homeostasis
regulation of transcription, DNA-templated
flavonoid glucuronidation
Transcription_related, Transcription factor: NAC
flavonoid biosynthetic process
intracellular signal transduction
details
CFinderADM001158calcium-mediated signaling
signal transducer activity
Ubiquitin_Proteasome_system, E3: U-box
ligase activity
ubiquitin-protein transferase activity
protein ubiquitination
intracellular
plasmodesma
details
CFinderADM001174glucose catabolic process
protein targeting
RIG-I-like receptor signaling pathway
spindle assembly
Transcriptional misregulation in cancers
microtubule minus-end binding
thiol-dependent ubiquitin-specific protease activity
spindle microtubule
HAUS complex
protein deubiquitination
Ubiquitin_Proteasome_system, DUB: OTU
nucleosome
formation of glycosidic bonds, GlycosylTransferases: GTnc
protein heterodimerization activity
trans-Golgi network
endosome
details
CFinderADM001250Pwp2p-containing subcomplex of 90S preribosome
nucleotide-excision repair
snoRNA binding
damaged DNA binding
maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
proteasome-mediated ubiquitin-dependent protein catabolic process
small-subunit processome
Ribosome biogenesis in eukaryotes
Protein processing in endoplasmic reticulum
details
CFinderADM001796regulation of microtubule-based process
cytoskeleton-dependent intracellular transport
protein localization
ATP-dependent microtubule motor activity, plus-end-directed
proteasome core complex, alpha-subunit complex
threonine-type endopeptidase activity
Proteasome
root development
microtubule-based movement
kinesin complex
microtubule binding
ubiquitin-dependent protein catabolic process
microtubule
details
CFinderADM002012Transcription_related, Transcription factor: C2H2
mitochondrion
nucleic acid binding
details
CFinderADM002088cytoskeleton-dependent intracellular transport
protein localization
regulation of microtubule-based process
ATP-dependent microtubule motor activity, plus-end-directed
root development
microtubule-based movement
kinesin complex
microtubule binding
microtubule
RNA transport
details

Expression profiles


Show details about module gene expression profiling
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