CFinderADM001796's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| regulation of microtubule-based process | 2.05E-05 | GO:0032886 |
| cytoskeleton-dependent intracellular transport | 2.05E-05 | GO:0030705 |
| protein localization | 2.05E-05 | GO:0008104 |
| ATP-dependent microtubule motor activity, plus-end-directed | 9.39E-05 | GO:0008574 |
| proteasome core complex, alpha-subunit complex | 0.000103467 | GO:0019773 |
| threonine-type endopeptidase activity | 0.000161893 | GO:0004298 |
| Proteasome | 0.000253097 | KEGG pathway |
| root development | 0.000511498 | GO:0048364 |
| microtubule-based movement | 0.000655545 | GO:0007018 |
| kinesin complex | 0.0007624 | GO:0005871 |
| microtubule binding | 0.000933372 | GO:0008017 |
| ubiquitin-dependent protein catabolic process | 0.001035875 | GO:0006511 |
| microtubule | 0.00134591 | GO:0005874 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T007007 | AT1G73875 (2.00E-26) | DNAse I-like superfamily protein |
| CRO_T026326 | - | - |
| CRO_T028044 | AT1G01950 (0) | ARK2|armadillo repeat kinesin 2; AtKINUb|KINESIN Ungrouped clade, gene B |
| CRO_T031509 | AT1G12930 (0) | ARM repeat superfamily protein |
| CRO_T033480 | AT1G47250 (1.00E-117) | PAF2|20S proteasome alpha subunit F2 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM001431 | myricetin 3'-O-methyltransferase activity 11-O-demethyl-17-O-deacetylvindoline O-methyltransferase activity Stilbenoid, diarylheptanoid and gingerol biosynthesis aromatic compound biosynthetic process alkaloid biosynthetic process syringetin biosynthesis phenylpropanoids methylation (ice plant) protein homodimerization activity methylation | details |
| CFinderADM001782 | threonine-type endopeptidase activity cytosolic ribosome proteasome core complex Proteasome proteolysis involved in cellular protein catabolic process formation of glycosidic bonds, GlycosylTransferases: GTnc | details |
| CFinderADM002054 | L-ascorbate degradation V ascorbate glutathione cycle SUMO activating enzyme activity regulation of mitotic cell cycle hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc Ubiquitin_Proteasome_system, E1: ThiF seed maturation protein sumoylation seed germination RNA splicing beta-galactosidase activity Ascorbate and aldarate metabolism Ubiquitin mediated proteolysis response to abscisic acid peroxidase activity carbohydrate binding cellular oxidant detoxification response to oxidative stress formation of glycosidic bonds, GlycosylTransferases: GTnc vacuolar membrane plant-type cell wall carbohydrate metabolic process heme binding | details |
| CFinderADM002088 | cytoskeleton-dependent intracellular transport protein localization regulation of microtubule-based process ATP-dependent microtubule motor activity, plus-end-directed root development microtubule-based movement kinesin complex microtubule binding microtubule RNA transport | details |
| CFinderADM002212 | phosphoric ester hydrolase activity carboxypeptidase activity 3-phosphoinositide biosynthesis seed development biosynthetic process carbohydrate binding vacuolar membrane plant-type cell wall endoplasmic reticulum Golgi apparatus proteolysis | details |
Expression profiles
 Show details about module gene expression profiling |