CFinderADM001804's detailed annotation
|
Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T006768 | AT1G51350 (4.00E-85) | ARM repeat superfamily protein |
| CRO_T006864 | AT5G62270 (5.00E-94) | GCD1|GAMETE CELL DEFECTIVE 1 |
| CRO_T013202 | AT4G09300 (5.00E-27) | LisH and RanBPM domains containing protein |
| CRO_T014193 | AT5G60030 (4.00E-14) | unknown protein |
| CRO_T030069 | AT2G02170 (3.00E-90) | Remorin family protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000222 | details | |
| CFinderADM001069 | malonyl-CoA biosynthetic process chloroplast stroma acetyl-CoA carboxylase complex acetyl-CoA carboxylase activity ATP synthesis coupled electron transport fatty acid biosynthetic process NADH dehydrogenase (ubiquinone) activity ATP binding Oxidative phosphorylation intracellular transferase activity integral component of membrane | details |
| CFinderADM001537 | protein binding, bridging lysosome organization regulation of SNARE complex assembly endosome organization vesicle docking involved in exocytosis HOPS complex Autophagy - yeast plant-type vacuole membrane intracellular protein transport endosome Ubiquitin_Proteasome_system, E3: RING zinc ion binding | details |
| CFinderADM001602 | protein kinase CK2 complex MAPK signaling pathway - fly protein kinase regulator activity regulation of protein kinase activity nuclear envelope Ran GTPase binding protein import into nucleus protein transporter activity Ribosome biogenesis in eukaryotes signal transduction kinase activity formation of glycosidic bonds, GlycosylTransferases: GTnc phosphorylation | details |
| CFinderADM001890 | arginine biosynthetic process via ornithine protein tetramerization argininosuccinate lyase activity phenylalanine-tRNA ligase complex phenylalanyl-tRNA aminoacylation L-arginine biosynthesis I (via L-ornithine) urea cycle L-arginine biosynthesis II (acetyl cycle) phenylalanine-tRNA ligase activity Cytochrome_P450, Cytochrome P450: CYP71B Protein_kinases_phosphatases, PPC:2.1.4: GmPK6/AtMRK1 Family tRNA binding vindoline and vinblastine biosynthesis Aminoacyl-tRNA biosynthesis Biosynthesis of amino acids oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen monooxygenase activity kinase activity phosphorylation iron ion binding heme binding chloroplast stroma | details |
| CFinderADM002273 | nuclear export signal receptor activity protein export from nucleus protein import into nucleus nuclear envelope Ran GTPase binding RNA processing plasmodesma nucleic acid binding nucleotide binding | details |
Expression profiles
 Show details about module gene expression profiling |