CFinderADM002273's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| nuclear export signal receptor activity | 1.71E-05 | GO:0005049 |
| protein export from nucleus | 1.73E-05 | GO:0006611 |
| protein import into nucleus | 0.000145677 | GO:0006606 |
| nuclear envelope | 0.000204625 | GO:0005635 |
| Ran GTPase binding | 0.000215471 | GO:0008536 |
| RNA processing | 0.000588085 | GO:0006396 |
| plasmodesma | 0.016052543 | GO:0009506 |
| nucleic acid binding | 0.01867531 | GO:0003676 |
| nucleotide binding | 0.021450285 | GO:0000166 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T013202 | AT4G09300 (5.00E-27) | LisH and RanBPM domains containing protein |
| CRO_T013404 | AT3G24530 (7.00E-11) | AAA-type ATPase family protein / ankyrin repeat family protein |
| CRO_T016642 | - | - |
| CRO_T018153 | AT2G31660 (5.00E-09) | EMA1|enhanced miRNA activity 1; SAD2|SUPER SENSITIVE TO ABA AND DROUGHT2; URM9|UNARMED 9 |
| CRO_T026933 | AT4G19400 (2.00E-05) | Profilin family protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM001426 | glucan 1,3-alpha-glucosidase activity histone acetyltransferase binding ribonucleoprotein complex binding transcription factor binding nuclear export signal receptor activity regulation of rRNA processing defense response signaling pathway, resistance gene-dependent maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) RNA polymerase II transcriptional preinitiation complex assembly protein export from nucleus PeBoW complex mRNA export from nucleus maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) transcription factor TFIID complex transcription regulatory region DNA binding transcription coactivator activity nuclear membrane nuclear envelope Ran GTPase binding protein import into nucleus nucleoplasm nuclear pore preribosome, large subunit precursor Basal transcription factors N-Glycan biosynthesis regulation of transcription from RNA polymerase II promoter response to auxin carbohydrate binding RNA transport carbohydrate metabolic process plasmodesma RNA binding | details |
| CFinderADM001528 | protein folding in endoplasmic reticulum defense response signaling pathway, resistance gene-dependent mRNA export from nucleus ER membrane protein complex Transcription_related, Transcription regulator: HMG nuclear membrane nuclear pore response to auxin RNA transport vacuolar membrane Ubiquitin_Proteasome_system, E3 adaptor: F-box Golgi apparatus | details |
| CFinderADM001529 | formation of glycosidic bonds, GlycosylTransferases: GTnc Transcription_related, Transcription regulator: HMG cell differentiation Transcription_related, Transcription factor: GRAS Golgi membrane transferase activity, transferring glycosyl groups cell wall organization Ubiquitin_Proteasome_system, E3 adaptor: F-box sequence-specific DNA binding transcription factor activity, sequence-specific DNA binding transcription, DNA-templated regulation of transcription, DNA-templated | details |
| CFinderADM001804 | details | |
| CFinderADM002236 | protein phosphatase type 2A complex protein phosphatase type 2A regulator activity regulation of protein phosphatase type 2A activity signal transduction mRNA surveillance pathway RNA degradation | details |
Expression profiles
 Show details about module gene expression profiling |