CFinderADM001926's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| diaminopimelate decarboxylase activity | 1.38E-05 | GO:0008836 |
| lysine biosynthetic process via diaminopimelate | 1.55E-05 | GO:0009089 |
| L-lysine biosynthesis VI | 2.14E-05 | plantCyc |
| lactoylglutathione lyase activity | 3.22E-05 | GO:0004462 |
| Pyruvate metabolism | 0.000111705 | KEGG pathway |
| Biosynthesis of amino acids | 0.001440997 | KEGG pathway |
| protein binding | 0.001781372 | GO:0005515 |
| membrane | 0.00256875 | GO:0016020 |
| catalytic activity | 0.008379555 | GO:0003824 |
| cytosol | 0.04574424 | GO:0005829 |
| chloroplast | 0.04574424 | GO:0009507 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T009007 | AT1G08110 (2.00E-80) | lactoylglutathione lyase family protein / glyoxalase I family protein |
| CRO_T009953 | AT2G01870 (5.00E-17) | unknown protein |
| CRO_T011885 | AT5G17840 (1.00E-28) | DnaJ/Hsp40 cysteine-rich domain superfamily protein |
| CRO_T014503 | AT3G25660 (5.00E-21) | Amidase family protein |
| CRO_T022268 | AT3G14390 (0) | Pyridoxal-dependent decarboxylase family protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000380 | spliceosomal complex assembly U5 snRNP U4/U6 x U5 tri-snRNP complex spliceosomal complex protein binding | details |
| CFinderADM000414 | lactoylglutathione lyase activity Pyruvate metabolism COP9 signalosome formation of translation preinitiation complex photomorphogenesis flower development regulation of translational initiation cytosol eukaryotic 48S preinitiation complex eukaryotic translation initiation factor 3 complex eukaryotic 43S preinitiation complex translation initiation factor activity RNA transport hydrolase activity chloroplast | details |
| CFinderADM001213 | MAPK signaling pathway - yeast protein domain specific binding nuclear envelope U5 snRNP U4/U6 x U5 tri-snRNP complex spliceosomal complex assembly protein import into nucleus spliceosomal complex protein transporter activity protein binding signal transduction | details |
| CFinderADM001214 | allantoin degradation to glyoxylate II allantoin degradation to ureidoglycolate II (ammonia producing) allantoin catabolic process ureide catabolic process purine nucleobase catabolic process ureidoglycine aminohydrolase activity histidine phosphotransfer kinase activity cytokinin-activated signaling pathway protein histidine kinase binding protein domain specific binding spliceosomal complex assembly U4/U6 x U5 tri-snRNP complex U5 snRNP MAPK signaling pathway - yeast spliceosomal complex phosphorelay signal transduction system protein binding Plant hormone signal transduction Purine metabolism phosphorylation integral component of membrane | details |
| CFinderADM001993 | diaminopimelate decarboxylase activity lysine biosynthetic process via diaminopimelate L-lysine biosynthesis VI protein binding Biosynthesis of amino acids | details |
Expression profiles
 Show details about module gene expression profiling |