CFinderADM002274's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Protein_kinases_phosphatases, PPC:1.9.3: Putative receptor like protein kinase | 2.36E-06 | kinase family |
| COPII vesicle coat | 0.000179257 | GO:0030127 |
| viral nucleocapsid | 0.000454225 | GO:0019013 |
| intracellular ribonucleoprotein complex | 0.000454225 | GO:0030529 |
| RNA processing | 0.001757635 | GO:0006396 |
| ER to Golgi vesicle-mediated transport | 0.001757635 | GO:0006888 |
| intracellular protein transport | 0.005113918 | GO:0006886 |
| Protein processing in endoplasmic reticulum | 0.0053906 | KEGG pathway |
| 2-alkenal reductase [NAD(P)] activity | 0.008463545 | GO:0032440 |
| protein kinase activity | 0.035965465 | GO:0004672 |
| RNA binding | 0.035965465 | GO:0003723 |
| protein phosphorylation | 0.045104759 | GO:0006468 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T002337 | AT1G61900 (8.00E-118) | unknown protein |
| CRO_T006734 | AT1G78530 (3.00E-48) | Protein kinase superfamily protein |
| CRO_T010457 | AT3G05680 (1.00E-19) | EMB2016|embryo defective 2016 |
| CRO_T015100 | AT4G32640 (6.00E-87) | Sec23/Sec24 protein transport family protein |
| CRO_T018835 | AT2G43970 (3.00E-21) | LARP6b|La related protein 6b |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000596 | actin binding serine-type endopeptidase activity proteolysis transport | details |
| CFinderADM000895 | COPII vesicle coat chaperone binding ER to Golgi vesicle-mediated transport Protein processing in endoplasmic reticulum intracellular protein transport transcription, DNA-templated regulation of transcription, DNA-templated zinc ion binding | details |
| CFinderADM001400 | Protein_kinases_phosphatases, PPC:1.9.3: Putative receptor like protein kinase inositol hexakisphosphate binding triacylglycerol degradation auxin-activated signaling pathway lipid metabolic process Plant hormone signal transduction 2-alkenal reductase [NAD(P)] activity Ubiquitin_Proteasome_system, E3 adaptor: F-box protein kinase activity RNA binding integral component of membrane | details |
| CFinderADM002271 | L-glutamate transmembrane transport L-glutamate import L-arginine import L-lysine transmembrane transport L-glutamate transmembrane transporter activity L-lysine transmembrane transporter activity positive regulation of proteasomal protein catabolic process positive regulation of RNA polymerase II transcriptional preinitiation complex assembly proteasome-activating ATPase activity cytosolic proteasome complex nuclear proteasome complex TBP-class protein binding proteasome regulatory particle, base subcomplex ER-associated ubiquitin-dependent protein catabolic process Proteasome ER to Golgi vesicle-mediated transport antiporter activity integral component of plasma membrane | details |
| CFinderADM002298 | galacturan 1,4-alpha-galacturonidase activity hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc polygalacturonase activity peptidyl-prolyl cis-trans isomerase activity lyase activity protein peptidyl-prolyl isomerization membrane part protein folding cell wall organization extracellular region endoplasmic reticulum plasmodesma carbohydrate metabolic process | details |
Expression profiles
 Show details about module gene expression profiling |