CFinderADM002305's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| recognition of pollen | 0.000124097 | GO:0048544 |
| Protein_kinases_phosphatases, PPC:1.9.2: S Domain Kinase (Type 2) | 0.000941633 | kinase family |
| carbohydrate binding | 0.004363365 | GO:0030246 |
| Ubiquitin_Proteasome_system, E3 adaptor: DWD | 0.011475239 | ubs family |
| adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 | 0.011984925 | cazy family |
| protein phosphorylation | 0.025665897 | GO:0006468 |
| protein serine/threonine kinase activity | 0.044777519 | GO:0004674 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T003736 | AT1G61380 (9.00E-91) | SD1-29|S-domain-1 29 |
| CRO_T019216 | - | - |
| CRO_T023993 | AT3G23710 (3.00E-74) | AtTic22-III|translocon at the inner envelope membrane of chloroplasts 22-III |
| CRO_T031939 | AT5G10550 (2.00E-74) | GTE2|global transcription factor group E2 |
| CRO_T033390 | AT4G26455 (8.00E-34) | AtWIP1|WPP domain interacting protein 1 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000832 | cellular protein metabolic process translational elongation Ubiquitin_Proteasome_system, DUB: USP cysteine-type peptidase activity translation elongation factor activity nucleotidyltransferase activity helicase activity GTPase activity intracellular proteolysis formation of glycosidic bonds, GlycosylTransferases: GTnc Ubiquitin_Proteasome_system, E3 adaptor: DWD GTP binding | details |
| CFinderADM001210 | Protein_kinases_phosphatases, PPC:1.9.2: S Domain Kinase (Type 2) aminoacyl-tRNA ligase activity nuclease activity tRNA aminoacylation for protein translation recognition of pollen Golgi organization Endocytosis response to auxin protein transport nucleic acid phosphodiester bond hydrolysis small GTPase mediated signal transduction plasma membrane GTPase activity carbohydrate binding Ubiquitin_Proteasome_system, E3 adaptor: F-box adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 GTP binding ATP binding phosphorylation Golgi apparatus intracellular metabolic process | details |
| CFinderADM001801 | xylulose metabolic process L-glutamate biosynthesis I xylulokinase activity heme biosynthesis I (aerobic) trans-lycopene biosynthesis II (plants) L-glutamine degradation I 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) recognition of pollen carbohydrate phosphorylation Protein_kinases_phosphatases, PPC:1.9.2: S Domain Kinase (Type 2) Pentose and glucuronate interconversions carbohydrate binding adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 nucleolus RNA binding protein phosphorylation protein serine/threonine kinase activity | details |
| CFinderADM002108 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity peptidyl-diphthamide biosynthetic process from peptidyl-histidine system development formation of glycosidic bonds, GlycosylTransferases: GTnc xylan biosynthesis Ubiquitin_Proteasome_system, E3 adaptor: DWD Golgi apparatus | details |
| CFinderADM002175 | Legionellosis protein lipoylation ribonuclease P activity tRNA processing glutathione transferase activity translation elongation factor activity RNA phosphodiester bond hydrolysis, endonucleolytic translational elongation glutathione metabolic process RNA transport vacuole | details |
| CFinderADM002253 | Transcription_related, Transcription regulator: IWS1 peroxiredoxin activity G-protein beta/gamma-subunit complex binding cellular nitrogen compound biosynthetic process ABC transporters G-protein coupled receptor signaling pathway gene expression cellular macromolecule biosynthetic process signal transducer activity mitochondrial matrix primary metabolic process response to oxidative stress cellular oxidant detoxification ATPase activity, coupled to transmembrane movement of substances peroxidase activity GTPase activity ubiquitin-protein transferase activity protein ubiquitination GTP binding transmembrane transport nucleic acid binding | details |
| CFinderADM002310 | L-gulono-1,4-lactone dehydrogenase activity galactonolactone dehydrogenase activity D-arabinono-1,4-lactone oxidase activity L-ascorbate biosynthesis I (L-galactose pathway) vacuole organization membrane coat Transcription_related, Transcription regulator: TRAF Ascorbate and aldarate metabolism Lysosome Ubiquitin_Proteasome_system, E3 adaptor: BTB formation of glycosidic bonds, GlycosylTransferases: GTnc flavin adenine dinucleotide binding methyltransferase activity vesicle-mediated transport plastid Plant hormone signal transduction intracellular protein transport methylation | details |
Expression profiles
 Show details about module gene expression profiling |