TissueCFM000060's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| 4-aminobutanoate degradation I | 0.00324939 | plantCyc |
| 4-aminobutanoate degradation IV | 0.00324939 | plantCyc |
| L-glutamate degradation IV | 0.007031925 | plantCyc |
| protein complex | 0.016233994 | GO:0043234 |
| spliceosomal complex | 0.017020784 | GO:0005681 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T005426 | AT3G06610 (6.00E-40) | DNA-binding enhancer protein-related |
| CRO_T006353 | - | - |
| CRO_T008138 | AT1G17650 (1.00E-80) | GLYR2|glyoxylate reductase 2 |
| CRO_T015992 | - | - |
| CRO_T018683 | - | - |
| CRO_T019811 | - | - |
| CRO_T022330 | - | - |
| CRO_T023064 | - | - |
| CRO_T023794 | - | - |
| CRO_T029746 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000119 | details | |
| TissueCFM000126 | fatty acid β-oxidation II (peroxisome) Fatty acid metabolism long-chain fatty acid activation oleate biosynthesis I (plants) cutin biosynthesis stearate biosynthesis II (bacteria and plants) sporopollenin precursors biosynthesis phosphatidylcholine acyl editing palmitate biosynthesis II (bacteria and plants) suberin monomers biosynthesis benzoyl-CoA biosynthesis 4-aminobutanoate degradation I 4-aminobutanoate degradation IV tricarboxylic acid cycle enzyme complex alpha-galactosidase activity transferase activity, transferring acyl groups other than amino-acyl groups fumarate hydratase activity | details |
| TissueCFM000143 | adenine and adenosine salvage II | details |
| TissueCFM000210 | Cytochrome_P450, Cytochrome P450: CYP96A farnesylcysteine salvage pathway geraniol kinase activity geranylgeraniol kinase activity CTP:2-trans,-6-trans-farnesol kinase activity anthranilate synthase complex L-tryptophan biosynthesis | details |
| TissueCFM000250 | details | |
| TissueCFM000270 | farnesylcysteine salvage pathway | details |
| TissueCFM000311 | Cyanoamino acid metabolism Transcription_related, Transcription regulator: TAZ | details |
Expression profiles
 Show details about module gene expression profiling |