TissueCFM000197's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| NAD binding | 0.004537096 | GO:0051287 |
| histidinol dehydrogenase activity | 0.040545502 | GO:0004399 |
Module member annotation
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000065 | iron reduction and absorption L-histidine biosynthesis histidinol dehydrogenase activity manganese:proton antiporter activity | details |
| TissueCFM000121 | Biosynthesis of amino acids ornithine carbamoyltransferase activity histidinol dehydrogenase activity L-citrulline degradation L-arginine biosynthesis I (via L-ornithine) L-arginine biosynthesis II (acetyl cycle) L-histidine biosynthesis ornithine-citrulline shuttle urea cycle organic acid transmembrane transporter activity | details |
| TissueCFM000144 | L-histidine biosynthesis histidinol dehydrogenase activity 7-methylguanosine RNA capping histidine biosynthetic process RNA methylation | details |
| TissueCFM000151 | Fatty acid metabolism | details |
| TissueCFM000159 | Cytochrome_P450, Cytochrome P450: CYP83B 4-hydroxy-tetrahydrodipicolinate synthase L-lysine biosynthesis VI salvigenin biosynthesis diaminopimelate biosynthetic process lysine biosynthetic process via diaminopimelate | details |
| TissueCFM000163 | Cytochrome_P450, Cytochrome P450: CYP81K | details |
| TissueCFM000175 | Biosynthesis of amino acids | details |
| TissueCFM000271 | carboxypeptidase activity histone H3-K36 methylation histone H3-K4 methylation negative regulation of flower development | details |
| TissueCFM000344 | Biosynthesis of amino acids Alanine, aspartate and glutamate metabolism L-arginine biosynthesis I (via L-ornithine) L-asparagine biosynthesis I L-asparagine biosynthesis II superpathway of L-asparagine biosynthesis urea cycle tau-protein kinase activity histidinol dehydrogenase activity phosphoric diester hydrolase activity argininosuccinate synthase activity Protein_kinases_phosphatases, PPC:4.5.4: GSK3/Shaggy Like Protein Kinase Family L-arginine biosynthesis II (acetyl cycle) L-glutamine degradation I L-histidine biosynthesis superpathway of aspartate and asparagine biosynthesis argininosuccinate metabolic process response to absence of light asparagine synthase (glutamine-hydrolyzing) activity asparagine biosynthetic process histidine biosynthetic process arginine biosynthetic process glutamine metabolic process protein phosphorylation ATP binding pollen development | details |
| TissueCFM000392 | carboxypeptidase activity phosphogluconate dehydrogenase (decarboxylating) activity Transcription_related, Transcription factor: LOB Protein export | details |
| TissueCFM000443 | ornithine carbamoyltransferase activity arginine biosynthetic process via ornithine urea cycle L-citrulline degradation L-arginine biosynthesis I (via L-ornithine) L-arginine biosynthesis II (acetyl cycle) ornithine-citrulline shuttle amino acid binding Biosynthesis of amino acids | details |
| TissueCFM000506 | Protein_kinases_phosphatases, PPC:4.5.2: CDC2 Like Kinase Family redox enzymes that act in conjunction with CAZymes, Auxiliary Activities: AA7 L-citrulline degradation cyclin-dependent protein serine/threonine kinase activity RNA polymerase II carboxy-terminal domain kinase activity ornithine carbamoyltransferase activity 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity | details |
| TissueCFM000521 | ent-kaurene biosynthesis I Diterpenoid biosynthesis terpene synthase activity Transcription_related, Transcription factor: bHLH | details |
| TissueCFM000588 | Biosynthesis of amino acids Protein_kinases_phosphatases, PPC:5.1.2: Other Kinase argininosuccinate synthase activity histidinol dehydrogenase activity L-arginine biosynthesis I (via L-ornithine) L-arginine biosynthesis II (acetyl cycle) L-histidine biosynthesis urea cycle xyloglucan biosynthesis argininosuccinate metabolic process aging histidine biosynthetic process shoot system development reproductive structure development D-myo-inositol (1,4,5)-trisphosphate biosynthesis arginine biosynthetic process single organism reproductive process 3-phosphoinositide biosynthesis | details |
| TissueCFM000611 | details | |
| TissueCFM000622 | L-histidine biosynthesis histidinol dehydrogenase activity regulation of shoot system development histidine biosynthetic process seed maturation regulation of seed germination Transcription_related, Transcription factor: Trihelix Biosynthesis of amino acids formation of glycosidic bonds, GlycosylTransferases: GTnc serine-type peptidase activity transcription regulatory region DNA binding pollen development | details |
| TissueCFM000638 | formation of glycosidic bonds, GlycosylTransferases: GTnc histidinol dehydrogenase activity beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity cytokinin-O-glucosides biosynthesis L-histidine biosynthesis protein N-linked glycosylation histidine biosynthetic process transferase activity, transferring hexosyl groups N-Glycan biosynthesis Zeatin biosynthesis pollen development Biosynthesis of amino acids NAD binding | details |
| TissueCFM000639 | Transcription_related, Transcription regulator: ARID | details |
| TissueCFM000680 | cytokinin dehydrogenase activity cytokinin metabolic process Zeatin biosynthesis oxidoreductase activity, acting on CH-OH group of donors flavin adenine dinucleotide binding histidinol dehydrogenase activity cytokinins degradation L-histidine biosynthesis histidine biosynthetic process oxidation-reduction process Protein_kinases_phosphatases, PPC:1.12.4: Leucine Rich Repeat Kinase XI & XII pollen development Biosynthesis of amino acids NAD binding | details |
| TissueCFM000945 | 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity Fatty acid metabolism fatty acid elongation -- saturated octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) stearate biosynthesis II (bacteria and plants) NAD binding palmitate biosynthesis II (bacteria and plants) fatty acid biosynthetic process | details |
| TissueCFM000956 | histidinol dehydrogenase activity L-histidine biosynthesis histidine biosynthetic process Biosynthesis of amino acids pollen development NAD binding | details |
| TissueCFM000993 | cytokinin metabolic process cytokinin dehydrogenase activity Zeatin biosynthesis oxidoreductase activity, acting on CH-OH group of donors flavin adenine dinucleotide binding histidinol dehydrogenase activity oxidation-reduction process cytokinins degradation L-histidine biosynthesis histidine biosynthetic process pollen development Biosynthesis of amino acids NAD binding chloroplast stroma | details |
| TissueCFM000996 | L-histidine biosynthesis histidinol dehydrogenase activity Biosynthesis of amino acids Protein_kinases_phosphatases, PPC:1.5.1: Wall Associated Kinase-like Kinase cell surface receptor signaling pathway histidine biosynthetic process pollen development | details |
| TissueCFM001020 | ornithine carbamoyltransferase activity 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity arginine biosynthetic process via ornithine urea cycle L-citrulline degradation fatty acid elongation -- saturated L-arginine biosynthesis I (via L-ornithine) L-arginine biosynthesis II (acetyl cycle) ornithine-citrulline shuttle octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) stearate biosynthesis II (bacteria and plants) amino acid binding NAD binding Biosynthesis of amino acids Fatty acid metabolism palmitate biosynthesis II (bacteria and plants) fatty acid biosynthetic process | details |
| TissueCFM001410 | ornithine carbamoyltransferase activity arginine biosynthetic process via ornithine 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity urea cycle L-citrulline degradation fatty acid elongation -- saturated L-arginine biosynthesis I (via L-ornithine) L-arginine biosynthesis II (acetyl cycle) ornithine-citrulline shuttle octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) stearate biosynthesis II (bacteria and plants) amino acid binding NAD binding Biosynthesis of amino acids Fatty acid metabolism palmitate biosynthesis II (bacteria and plants) | details |
Expression profiles
 Show details about module gene expression profiling |