TissueCFM000495's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Protein_kinases_phosphatases, PPC:4.5.7: Unknown Function Kinase | 0.002925532 | kinase family |
| negative regulation of cellular process | 0.008096328 | GO:0048523 |
| protein serine/threonine/tyrosine kinase activity | 0.01930423 | GO:0004712 |
| Transcription_related, Transcription factor: bZIP | 0.0194503 | TF family |
| Plant hormone signal transduction | 0.028561169 | KEGG pathway |
| Ubiquitin_Proteasome_system, E3: U-box | 0.034835127 | ubs family |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000268 | AT1G69260 (4.00E-27) | AFP1|ABI five binding protein |
| CRO_T002932 | AT1G49720 (9.00E-57) | ABF1|abscisic acid responsive element-binding factor 1 |
| CRO_T019799 | AT5G48820 (8.00E-22) | ICK6|inhibitor/interactor with cyclin-dependent kinase; KRP3|KIP-RELATED PROTEIN 3 |
| CRO_T020535 | AT3G54850 (6.00E-73) | PUB14|plant U-box 14 |
| CRO_T025257 | AT3G53570 (9.00E-38) | AFC1|FUS3-complementing gene 1 |
| CRO_T026402 | AT4G13670 (3.00E-84) | PTAC5|plastid transcriptionally active 5 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM001336 | chlorophyll a degradation II Protein_kinases_phosphatases, PPC:4.5.7: Unknown Function Kinase formation of glycosidic bonds, GlycosylTransferases: GTnc Protein_kinases_phosphatases, PPC:1.9.2: S Domain Kinase (Type 2) translational termination plastid organization recognition of pollen protein serine/threonine kinase activity ribosome binding heat shock protein binding nucleotide binding protein serine/threonine/tyrosine kinase activity translation release factor activity, codon specific endonuclease activity protein phosphorylation RNA processing nucleic acid phosphodiester bond hydrolysis microtubule-based movement | details |
| TissueCFM001387 | Cytochrome_P450, Cytochrome P450: CYP89A vernolate biosynthesis I L-gulono-1,4-lactone dehydrogenase activity galactonolactone dehydrogenase activity poly-hydroxy fatty acids biosynthesis L-ascorbate biosynthesis I (L-galactose pathway) D-arabinono-1,4-lactone oxidase activity Ascorbate and aldarate metabolism Transcription_related, Transcription factor: bZIP Plant hormone signal transduction | details |
| TissueCFM001690 | Ribosome translation Protein_kinases_phosphatases, PPC:4.5.7: Unknown Function Kinase structural constituent of ribosome geraniol and geranial biosynthesis cell morphogenesis protein serine/threonine/tyrosine kinase activity sinapyl alcohol dehydrogenase activity cinnamyl-alcohol dehydrogenase activity Phenylpropanoid biosynthesis lignin biosynthetic process cell wall organization or biogenesis O-acetyltransferase activity | details |
Expression profiles
 Show details about module gene expression profiling |