TissueCFM000499's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 | 0.039327235 | cazy family |
| hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc | 0.04022298 | cazy family |
| plant-type cell wall organization | 0.043585294 | GO:0009664 |
| cellulose biosynthetic process | 0.043585294 | GO:0030244 |
| guard cell differentiation | 0.043585294 | GO:0010052 |
| protein catabolic process | 0.043585294 | GO:0030163 |
| MAPK cascade | 0.043585294 | GO:0000165 |
| cellulose catabolic process | 0.043585294 | GO:0030245 |
| activation of MAPKK activity | 0.043585294 | GO:0000186 |
| MAP kinase kinase kinase activity | 0.047074051 | GO:0004709 |
| phosphoprotein phosphatase activity | 0.047074051 | GO:0004721 |
| cellulose synthase (UDP-forming) activity | 0.047074051 | GO:0016760 |
| aspartic-type endopeptidase activity | 0.047074051 | GO:0004190 |
| cellulase activity | 0.047074051 | GO:0008810 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000491 | AT2G21770 (1.00E-79) | CESA9|cellulose synthase A9 |
| CRO_T003267 | AT1G02800 (0) | ATCEL2|cellulase 2 |
| CRO_T010260 | AT5G22850 (4.00E-25) | Eukaryotic aspartyl protease family protein |
| CRO_T019130 | AT5G07280 (0) | EMS1|EXCESS MICROSPOROCYTES1; EXS|EXTRA SPOROGENOUS CELLS |
| CRO_T021676 | AT2G42840 (6.00E-23) | PDF1|protodermal factor 1 |
| CRO_T025030 | AT2G03090 (3.00E-100) | ATEXPA15|expansin A15; EXP15|EXPANSIN 15 |
| CRO_T028055 | AT1G34640 (6.00E-20) | peptidases |
| CRO_T030248 | AT2G30370 (5.00E-12) | CHAL|CHALLAH; EPFL6|EPF1-like 6 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000826 | Antigen processing and presentation Protein_kinases_phosphatases, PPC:4.1.6: Unknown Function Kinase adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc guard cell differentiation cellulase activity transcription cofactor activity cellulose catabolic process protein catabolic process aspartic-type endopeptidase activity membrane | details |
| TissueCFM000949 | starch biosynthesis Cell cycle - yeast formation of glycosidic bonds, GlycosylTransferases: GTnc MAP kinase kinase kinase activity NF-kappa B signaling pathway chromosome organization activation of MAPKK activity MAPK cascade plant-type cell wall organization Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII | details |
| TissueCFM001204 | 2-oxoglutarate decarboxylation to succinyl-CoA 2-oxoisovalerate decarboxylation to isobutanoyl-CoA glycine cleavage pyruvate decarboxylation to acetyl CoA Transcription_related, Transcription factor: DBP Transcription_related, Transcription factor: GRF | details |
| TissueCFM001292 | adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 cellulose catabolic process hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc cellulase activity Fatty acid elongation guard cell differentiation L-gulonolactone oxidase activity D-arabinono-1,4-lactone oxidase activity membrane | details |
| TissueCFM001640 | Antigen processing and presentation cell wall hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc cytoplasmic, membrane-bounded vesicle plant-type cell wall organization protein catabolic process beta-galactosidase activity aspartic-type endopeptidase activity dioxygenase activity carbohydrate binding | details |
| TissueCFM001644 | acetylglucosaminyltransferase activity sugar transmembrane transporter activity potassium ion transmembrane transporter activity cellulase activity cellulose catabolic process carbohydrate transmembrane transport potassium ion transmembrane transport amino acid transmembrane transport amino acid transmembrane transporter activity adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc formation of glycosidic bonds, GlycosylTransferases: GTnc polysaccharide binding integral component of membrane plasma membrane anchored component of plasma membrane Plant hormone signal transduction Starch and sucrose metabolism | details |
Expression profiles
 Show details about module gene expression profiling |