TissueCFM000631's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| sucrose alpha-glucosidase activity | 0.011126695 | GO:0004575 |
| glycopeptide alpha-N-acetylgalactosaminidase activity | 0.011126695 | GO:0033926 |
| hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc | 0.011815964 | cazy family |
| Protein_kinases_phosphatases, PPC:4.2.4: SNF1 Related Protein Kinase (SnRK) | 0.014745966 | kinase family |
| Transcription_related, Transcription regulator: mTERF | 0.014745966 | TF family |
| double-stranded DNA binding | 0.020201974 | GO:0003690 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T007201 | AT1G50020 (3.00E-41) | unknown protein |
| CRO_T007320 | AT5G10930 (4.00E-178) | CIPK5|CBL-interacting protein kinase 5; SnRK3.24|SNF1-RELATED PROTEIN KINASE 3.24 |
| CRO_T013432 | AT1G22650 (0) | A/N-InvD|alkaline/neutral invertase D |
| CRO_T023074 | AT5G21160 (7.00E-15) | AtLARP1a|La related protein 1a |
| CRO_T024169 | - | - |
| CRO_T032742 | AT1G55000 (4.00E-84) | peptidoglycan-binding LysM domain-containing protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000108 | lysyl-tRNA aminoacylation plasmodesma lysine-tRNA ligase activity single-organism metabolic process phosphatidylcholine acyl editing phospholipases phospholipid remodeling (phosphatidylcholine, yeast) cytosol Peroxisome Aminoacyl-tRNA biosynthesis Ubiquitin_Proteasome_system, E3 adaptor: DWD | details |
| TissueCFM000416 | hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc endoplasmic reticulum lysyl-tRNA aminoacylation sucrose alpha-glucosidase activity glycopeptide alpha-N-acetylgalactosaminidase activity lysine-tRNA ligase activity phosphorelay sensor kinase activity phosphorelay signal transduction system signal transduction by protein phosphorylation | details |
| TissueCFM000479 | hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc fatty-acyl-CoA binding sucrose alpha-glucosidase activity glycopeptide alpha-N-acetylgalactosaminidase activity Protein export 2-alkenal reductase [NAD(P)] activity | details |
| TissueCFM001351 | Pathogenic Escherichia coli infection | details |
| TissueCFM001671 | lysyl-tRNA aminoacylation regulation of ruffle assembly ruffle membrane tRNA processing lysine-tRNA ligase activity nucleic acid binding Transcription_related, Transcription factor: C2H2 rRNA processing Aminoacyl-tRNA biosynthesis Ribosome biogenesis in eukaryotes phosphatidylinositol binding | details |
| TissueCFM001686 | phospholipid desaturation Protein_kinases_phosphatases, PPC:1.11.1: Legume Lectin Domain Kinase Transcription_related, Transcription regulator: SET Oxidative phosphorylation | details |
| TissueCFM001713 | phospholipid desaturation lysyl-tRNA aminoacylation Transcription_related, Transcription factor: C2H2 lysine-tRNA ligase activity nucleic acid binding Aminoacyl-tRNA biosynthesis Ribosome biogenesis in eukaryotes tRNA processing rRNA processing chloroplast inner membrane | details |
Expression profiles
 Show details about module gene expression profiling |