TissueCFM001038's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| quinone binding | 0.000363222 | GO:0048038 |
| NAD binding | 0.000423694 | GO:0051287 |
| Oxidative phosphorylation | 0.000787203 | KEGG pathway |
| phosphatidate metabolism, as a signaling molecule | 0.004955377 | plantCyc |
| NADH dehydrogenase activity | 0.006947787 | GO:0003954 |
| mitochondrion | 0.027649627 | GO:0005739 |
| respiratory chain | 0.030204674 | GO:0070469 |
| oxidation-reduction process | 0.033990665 | GO:0055114 |
| protein ubiquitination | 0.033990665 | GO:0016567 |
| NADH dehydrogenase (ubiquinone) activity | 0.045386483 | GO:0008137 |
| ligase activity | 0.049185843 | GO:0016874 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T001716 | AT5G58410 (3.00E-25) | HEAT/U-box domain-containing protein |
| CRO_T006333 | - | - |
| CRO_T018346 | - | - |
| CRO_T020521 | AT4G13030 (1.00E-66) | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| CRO_T021670 | ATMG00510 (9.00E-50) | NAD7|NADH dehydrogenase subunit 7 |
| CRO_T031430 | ATMG00510 (3.00E-137) | NAD7|NADH dehydrogenase subunit 7 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000648 | ascorbate glutathione cycle L-ascorbate degradation V Ascorbate and aldarate metabolism Pyruvate metabolism phosphatidate metabolism, as a signaling molecule seed maturation seed germination chloroplast organization chloroplast stroma | details |
| TissueCFM000750 | clathrin-mediated endocytosis clathrin heavy chain binding Transcription_related, Transcription factor: BBR-BPC leucopelargonidin and leucocyanidin biosynthesis phosphatidate metabolism, as a signaling molecule structural molecule activity clathrin vesicle coat Transcription_related, Transcription factor: GRAS | details |
| TissueCFM001037 | mitochondrion hydrogen ion transmembrane transporter activity ATP synthesis coupled proton transport quinone binding NAD binding Oxidative phosphorylation NADH dehydrogenase activity phosphatidate metabolism, as a signaling molecule respiratory chain NADH dehydrogenase (ubiquinone) activity oxidation-reduction process | details |
| TissueCFM001355 | adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 phosphatidate metabolism, as a signaling molecule replication fork Rad51B-Rad51C-Rad51D-XRCC2 complex meiotic DNA recombinase assembly mitotic recombination response to ionizing radiation strand invasion reciprocal meiotic recombination cellular water homeostasis glycerol transport water transport ion transmembrane transport recombinase activity endodeoxyribonuclease activity four-way junction DNA binding glycerol channel activity single-stranded DNA binding DNA-dependent ATPase activity water channel activity double-stranded DNA binding coenzyme binding Homologous recombination RNA transport | details |
Expression profiles
 Show details about module gene expression profiling |