TissueCFM001127's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| cholesterol binding | 0.005266852 | GO:0015485 |
| thiol oxidase activity | 0.005266852 | GO:0016972 |
| SREBP signaling pathway | 0.00608174 | GO:0032933 |
| Calcium signaling pathway | 0.009917054 | KEGG pathway |
| voltage-gated anion channel activity | 0.015790752 | GO:0008308 |
| ER-associated ubiquitin-dependent protein catabolic process | 0.019229837 | GO:0030433 |
| regulation of anion transmembrane transport | 0.019229837 | GO:1903959 |
| stromule | 0.022462938 | GO:0010319 |
| mitochondrial outer membrane | 0.022462938 | GO:0005741 |
| chloroplast outer membrane | 0.022462938 | GO:0009707 |
| Endocytosis | 0.030760952 | KEGG pathway |
| ubiquitin protein ligase binding | 0.045130591 | GO:0031625 |
| identical protein binding | 0.045130591 | GO:0042802 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T007308 | AT1G49880 (7.00E-23) | EMB3106|EMBRYO DEFECTIVE 3106; Erv1|Erv1 |
| CRO_T015505 | AT2G03510 (2.00E-105) | SPFH/Band 7/PHB domain-containing membrane-associated protein family |
| CRO_T025122 | AT2G34920 (0.0000001) | EDA18|embryo sac development arrest 18 |
| CRO_T025403 | AT1G60660 (2.00E-16) | ATCB5LP|ARABIDOPSIS CYTOCHROME B5-LIKE PROTEIN; CB5LP|cytochrome B5-like protein |
| CRO_T025601 | AT3G09570 (0) | Lung seven transmembrane receptor family protein |
| CRO_T029736 | AT5G57490 (8.00E-99) | ATVDAC4|VOLTAGE DEPENDENT ANION CHANNEL 4 |
| CRO_T029926 | AT3G18820 (6.00E-106) | ATRAB7B|RAB GTPase homolog G3F |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000124 | NF-kappa B signaling pathway Protein_kinases_phosphatases, PPC:1.5.2: LRK10 Like Kinase (Type 1) Protein_kinases_phosphatases, PPC:1.6.2: Plant External Response Like Kinase pyruvate fermentation to lactate vindoline and vinblastine biosynthesis | details |
| TissueCFM000597 | Transcription_related, Transcription regulator: LIM SREBP signaling pathway endoplasmic reticulum signal peptide binding cholesterol binding U2-type catalytic step 1 spliceosome cytoskeleton organization SRP-dependent cotranslational protein targeting to membrane signal recognition particle, endoplasmic reticulum targeting ER-associated ubiquitin-dependent protein catabolic process 7S RNA binding Protein export mRNA splicing, via spliceosome Endocytosis catalytic step 2 spliceosome small GTPase mediated signal transduction | details |
| TissueCFM001708 | inosine nucleosidase activity protein targeting to ER inosine catabolic process signal peptidase complex adenine and adenosine salvage II guanosine nucleotides degradation I pyrimidine ribonucleosides salvage II pyrimidine salvage pathway signal peptide processing adenosine nucleotides degradation I DNA replication Protein export DNA recombination UDP-glucosyltransferase activity DNA repair peptidase activity | details |
Expression profiles
 Show details about module gene expression profiling |