TissueCFM001283's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| transport | 0.033743009 | GO:0006810 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000370 | AT1G42540 (4.00E-144) | GLR3.3|glutamate receptor 3.3 |
| CRO_T001437 | AT3G17210 (7.00E-33) | ATHS1|A. THALIANA HEAT STABLE PROTEIN 1; HS1|heat stable protein 1 |
| CRO_T004792 | - | - |
| CRO_T016453 | - | - |
| CRO_T028937 | AT5G54310 (2.00E-15) | AGD5|ARF-GAP domain 5; NEV|NEVERSHED |
| CRO_T030421 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000047 | post-embryonic root development Human papillomavirus infection MAPK signaling pathway - yeast Pyruvate metabolism | details |
| TissueCFM000115 | ent-kaurene biosynthesis I multi-organism process metabolic process arginine biosynthetic process 2-Oxocarboxylic acid metabolism Diterpenoid biosynthesis root development Transcription_related, Transcription factor: bHLH terpene synthase activity N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity | details |
| TissueCFM000128 | Transcription_related, Transcription factor: HB | details |
| TissueCFM000129 | post-embryonic root development MAPK signaling pathway - yeast Propanoate metabolism protein domain specific binding Transcription_related, Transcription factor: FAR1 | details |
| TissueCFM000130 | vitamin E biosynthesis (tocopherols) | details |
| TissueCFM000159 | Cytochrome_P450, Cytochrome P450: CYP83B 4-hydroxy-tetrahydrodipicolinate synthase L-lysine biosynthesis VI salvigenin biosynthesis diaminopimelate biosynthetic process lysine biosynthetic process via diaminopimelate | details |
| TissueCFM000271 | carboxypeptidase activity histone H3-K36 methylation histone H3-K4 methylation negative regulation of flower development | details |
| TissueCFM000440 | post-embryonic root development DNA recombination MAPK signaling pathway - yeast protein domain specific binding | details |
| TissueCFM000445 | Mannose type O-glycan biosyntheis post-embryonic root development hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc MAPK signaling pathway - yeast | details |
| TissueCFM000562 | details | |
| TissueCFM000592 | post-embryonic root development protein domain specific binding MAPK signaling pathway - yeast MAPK signaling pathway - plant | details |
| TissueCFM000898 | manganese:proton antiporter activity response to copper ion response to manganese ion Cell cycle manganese ion transmembrane transport cellular manganese ion homeostasis mitotic sister chromatid cohesion response to zinc ion regulation of sequestering of zinc ion late endosome cohesin core heterodimer phenylpropanoid biosynthetic process Transcription_related, Transcription factor: bHLH zinc II ion transmembrane transport guiding stereospecific synthesis activity zinc ion transmembrane transporter activity chromatin binding regulation of catalytic activity DNA repair | details |
| TissueCFM000977 | Cytochrome_P450, Cytochrome P450: CYP722A brassinosteroid homeostasis brassinosteroid biosynthetic process sterol metabolic process multicellular organism development Transcription_related, Transcription factor: bHLH | details |
| TissueCFM001086 | ABC transporters auxin influx transmembrane transporter activity taurine-transporting ATPase activity root hair elongation gravitropism amine transport basipetal auxin transport auxin efflux auxin influx xenobiotic transport auxin efflux transmembrane transporter activity xenobiotic-transporting ATPase activity Transcription_related, Transcription factor: MYB | details |
| TissueCFM001174 | Transcription_related, Transcription factor: bHLH Cytochrome_P450, Cytochrome P450: CYP735A trans-zeatin biosynthesis Zeatin biosynthesis anion transmembrane transport potassium ion transmembrane transport secologanin synthase activity potassium ion transmembrane transporter activity | details |
Expression profiles
 Show details about module gene expression profiling |