TissueCFM001320's detailed annotation
|
Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| very long chain fatty acid biosynthesis I | 0.01050423 | plantCyc |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T008541 | - | - |
| CRO_T008730 | - | - |
| CRO_T014500 | - | - |
| CRO_T017377 | - | - |
| CRO_T019325 | AT3G06470 (7.00E-75) | GNS1/SUR4 membrane protein family |
| CRO_T022410 | - | - |
| CRO_T029279 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000041 | details | |
| TissueCFM000150 | binding very long chain fatty acid biosynthesis I | details |
| TissueCFM000246 | details | |
| TissueCFM000360 | transcriptional repressor complex autophagosome pre-autophagosomal structure piecemeal microautophagy of nucleus protein localization to pre-autophagosomal structure mitophagy late nucleophagy Cell cycle Protein_kinases_phosphatases, PPC:1.5.3: Receptor Like Cytoplasmic Kinase IV Autophagy - animal Insulin signaling pathway MAPK signaling pathway | details |
| TissueCFM000376 | DNA integration very long chain fatty acid biosynthesis I | details |
| TissueCFM000424 | regulation of transcription from RNA polymerase II promoter very long chain fatty acid biosynthesis I RNA polymerase II regulatory region sequence-specific DNA binding | details |
| TissueCFM000523 | intracellular protein transport 1-phosphatidylinositol 4-kinase activity phosphatidylinositol-mediated signaling membrane coat COPII vesicle coat phosphatidylinositol phosphorylation 3-phosphoinositide biosynthesis D-myo-inositol (1,4,5)-trisphosphate biosynthesis very long chain fatty acid biosynthesis I ER to Golgi vesicle-mediated transport Inositol phosphate metabolism Lysosome vesicle-mediated transport | details |
| TissueCFM000553 | very long chain fatty acid biosynthesis I | details |
| TissueCFM000695 | Hedgehog signaling pathway Protein_kinases_phosphatases, PPC:1.12.1: Leucine Rich Repeat Kinase X very long chain fatty acid biosynthesis I ABC transporters integral component of mitochondrial inner membrane mitochondrial inner membrane presequence translocase complex G-protein coupled receptor signaling pathway protein import into chloroplast stroma protein import into mitochondrial matrix chloroplast plasma membrane G-protein beta/gamma-subunit complex binding protein channel activity | details |
| TissueCFM000866 | very long chain fatty acid biosynthesis I protein ubiquitination involved in ubiquitin-dependent protein catabolic process proteasome-mediated ubiquitin-dependent protein catabolic process protein polyubiquitination | details |
| TissueCFM000905 | very long chain fatty acid biosynthesis I | details |
| TissueCFM001099 | L-phenylalanine catabolic process cinnamic acid biosynthetic process Phenylalanine metabolism Protein_kinases_phosphatases, PPC:1.1.3: Putative protein kinase/Putative receptor-like protein kinase trans-cinnamoyl-CoA biosynthesis phenylpropanoid biosynthesis, initial reactions adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 phenylalanine ammonia-lyase activity protein kinase activity ammonium transmembrane transporter activity ammonium transmembrane transport NF-kappa B signaling pathway suberin monomers biosynthesis very long chain fatty acid biosynthesis I | details |
| TissueCFM001427 | vesicle-mediated transport intracellular protein transport transcriptional repressor complex Golgi apparatus part intracellular transport Cell cycle vacuolar transport Lysosome Transcription_related, Transcription factor: MYB-related very long chain fatty acid biosynthesis I membrane coat | details |
| TissueCFM001449 | phosphatidylethanolamine biosynthesis I FoxO signaling pathway Protein digestion and absorption Ubiquitin_Proteasome_system, DUB: ULP Ubiquitin_Proteasome_system, DUB: USP Ubiquitin_Proteasome_system, E3: HECT very long chain fatty acid biosynthesis I Glycerophospholipid metabolism | details |
Expression profiles
 Show details about module gene expression profiling |