TissueCFM001597's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| myosin complex | 0.002480253 | GO:0016459 |
| motor activity | 0.01364139 | GO:0003774 |
| actin binding | 0.017995516 | GO:0003779 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T004672 | AT3G50380 (0) | Protein of unknown function (DUF1162) |
| CRO_T005543 | AT3G49740 (6.00E-168) | Tetratricopeptide repeat (TPR)-like superfamily protein |
| CRO_T006250 | AT1G04160 (0) | ATXIB|MYOSIN XI B; XI-8|MYOSIN XI-8 |
| CRO_T017997 | AT1G17680 (2.00E-32) | tetratricopeptide repeat (TPR)-containing protein |
| CRO_T027558 | AT3G18310 (1.00E-95) | unknown protein |
| CRO_T030144 | AT5G56310 (1.00E-74) | Pentatricopeptide repeat (PPR) superfamily protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000765 | regulation of cell shape cytoskeleton organization myosin complex regulation of transcription from RNA polymerase II promoter ATP-dependent helicase activity motor activity actin binding nucleus Transcription_related, Transcription regulator: SNF2 | details |
| TissueCFM000839 | details | |
| TissueCFM000840 | Cytochrome_P450, Cytochrome P450: CYP716A 2α,7β-dihydroxylation of taxusin betulinate biosynthesis oleanolate biosynthesis ursolate biosynthesis sterol metabolic process brassinosteroid homeostasis brassinosteroid biosynthetic process Endocytosis multicellular organism development | details |
| TissueCFM000852 | cyclic pyranopterin monophosphate synthase activity Mo-molybdopterin cofactor biosynthetic process molybdopterin cofactor biosynthetic process Folate biosynthesis Basal transcription factors Endocytosis | details |
| TissueCFM001008 | L-tryptophan degradation VI (via tryptamine) xanthine catabolic process Ubiquitin_Proteasome_system, E3: HECT xanthine dehydrogenase activity oxidoreductase activity, acting on the aldehyde or oxo group of donors Carotenoid biosynthesis Ubiquitin mediated proteolysis 2 iron, 2 sulfur cluster binding oxidoreductase activity, acting on CH-OH group of donors | details |
| TissueCFM001326 | formation of glycosidic bonds, GlycosylTransferases: GTnc Transcription_related, Transcription factor: BBR-BPC regulation of biological process folic acid-containing compound biosynthetic process | details |
| TissueCFM001367 | Calcium signaling pathway Regulation of actin cytoskeleton Set1C/COMPASS complex mitochondrial outer membrane myosin complex regulation of anion transmembrane transport anion transport vegetative to reproductive phase transition of meristem voltage-gated anion channel activity histone binding motor activity actin binding Transcription_related, Transcription factor: HB | details |
| TissueCFM001496 | One carbon pool by folate 5-formyltetrahydrofolate cyclo-ligase activity folate transformations II folic acid-containing compound biosynthetic process potassium ion transport tetrahydrofolate interconversion cation transmembrane transport cation transmembrane transporter activity | details |
| TissueCFM001598 | polysaccharide biosynthetic process xylan biosynthetic process homogalacturonan biosynthesis formation of glycosidic bonds, GlycosylTransferases: GTnc transferase activity, transferring glycosyl groups | details |
Expression profiles
 Show details about module gene expression profiling |