TissueCFM001675's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| racemase and epimerase activity, acting on carbohydrates and derivatives | 0.008756719 | GO:0016857 |
| cytidylate kinase activity | 0.008756719 | GO:0004127 |
| uridylate kinase activity | 0.008756719 | GO:0009041 |
| pyrimidine nucleotide biosynthetic process | 0.012579966 | GO:0006221 |
| 'de novo' pyrimidine nucleobase biosynthetic process | 0.012579966 | GO:0006207 |
| nucleotide phosphorylation | 0.012579966 | GO:0046939 |
| CMP phosphorylation | 0.013497196 | plantCyc |
| pyrimidine deoxyribonucleotide phosphorylation | 0.013497196 | plantCyc |
| UDP-D-galacturonate biosynthesis I (from UDP-D-glucuronate) | 0.013497196 | plantCyc |
| UDP-sugars interconversion | 0.013497196 | plantCyc |
| UTP and CTP de novo biosynthesis | 0.013497196 | plantCyc |
| potassium ion transmembrane transporter activity | 0.014063319 | GO:0015079 |
| acetylglucosaminyltransferase activity | 0.014994226 | GO:0008375 |
| formation of glycosidic bonds, GlycosylTransferases: GTnc | 0.015210399 | cazy family |
| potassium ion transmembrane transport | 0.018255972 | GO:0071805 |
| adenosine ribonucleotides de novo biosynthesis | 0.020593315 | plantCyc |
| Pyrimidine metabolism | 0.021657047 | KEGG pathway |
| pyrimidine ribonucleotides interconversion | 0.023512281 | plantCyc |
| coenzyme binding | 0.024324613 | GO:0050662 |
| Amino sugar and nucleotide sugar metabolism | 0.024958347 | KEGG pathway |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T001697 | AT4G04180 (0) | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| CRO_T010353 | AT4G23920 (2.00E-23) | ATUGE2|UDP-GLC 4-EPIMERASE 2; UGE2|UDP-D-glucose/UDP-D-galactose 4-epimerase 2 |
| CRO_T013868 | AT3G62630 (4.00E-47) | Protein of unknown function (DUF1645) |
| CRO_T014309 | AT2G37250 (1.00E-16) | ADK|adenosine kinase |
| CRO_T017160 | AT1G60160 (1.00E-161) | Potassium transporter family protein |
| CRO_T029751 | AT3G52060 (9.00E-84) | GnTL|beta-1,6-N-acetylglucosaminyl transferase-like |
| CRO_T029955 | AT3G19770 (3.00E-19) | ATVPS9A|VACUOLAR PROTEIN SORTING 9A |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM001286 | integral component of membrane external side of plasma membrane Cytochrome_P450, Cytochrome P450: CYP94B Transcription_related, Transcription regulator: LIM Glycerolipid metabolism sphingomyelin phosphodiesterase D activity fatty acid transporter activity fatty acid transport stem vascular tissue pattern formation cutin transport | details |
| TissueCFM001616 | GDP-mannose biosynthesis L-ascorbate biosynthesis I (L-galactose pathway) Fructose and mannose metabolism mannose-1-phosphate guanylyltransferase (GDP) activity water channel activity glycerol channel activity Protein_kinases_phosphatases, PPC:4.2.6: IRE/NPH/PI dependent/S6 Kinase water transport glycerol transport cellular water homeostasis ion transmembrane transport Ubiquitin_Proteasome_system, E3: U-box biosynthetic process intracellular signal transduction | details |
| TissueCFM001644 | acetylglucosaminyltransferase activity sugar transmembrane transporter activity potassium ion transmembrane transporter activity cellulase activity cellulose catabolic process carbohydrate transmembrane transport potassium ion transmembrane transport amino acid transmembrane transport amino acid transmembrane transporter activity adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc formation of glycosidic bonds, GlycosylTransferases: GTnc polysaccharide binding integral component of membrane plasma membrane anchored component of plasma membrane Plant hormone signal transduction Starch and sucrose metabolism | details |
| TissueCFM001674 | formation of glycosidic bonds, GlycosylTransferases: GTnc γ-glutamyl cycle sphingomyelin phosphodiesterase D activity potassium ion transmembrane transport acetylglucosaminyltransferase activity potassium ion transmembrane transporter activity integral component of membrane | details |
| TissueCFM001765 | floral organ development regulation of meristem growth Transcription_related, Transcription factor: C2C2-Dof Protein_kinases_phosphatases, PPC:1.12.4: Leucine Rich Repeat Kinase XI & XII protein-cysteine S-palmitoyltransferase activity | details |
Expression profiles
 Show details about module gene expression profiling |