TissueCFM001682's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Protein_kinases_phosphatases, PPC:2.1.3: CTR1/EDR1 Kinase | 0.006378735 | kinase family |
| Protein_kinases_phosphatases, PPC:4.5.2: CDC2 Like Kinase Family | 0.006638137 | kinase family |
| gluconeogenesis I | 0.008834517 | plantCyc |
| malate dehydrogenase (decarboxylating) (NAD+) activity | 0.027079862 | GO:0004471 |
| carbohydrate transport | 0.031310746 | GO:0008643 |
| malate metabolic process | 0.031310746 | GO:0006108 |
| cobalt ion binding | 0.036079814 | GO:0050897 |
| Carbon metabolism | 0.047108101 | KEGG pathway |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T012915 | AT5G11850 (5.00E-67) | Protein kinase superfamily protein |
| CRO_T019353 | AT2G13560 (0) | NAD-ME1|NAD-dependent malic enzyme 1 |
| CRO_T022465 | AT1G21460 (2.00E-72) | AtSWEET1; SWEET1|Nodulin MtN3 family protein |
| CRO_T030898 | AT5G10270 (0) | CDKC; 1|cyclin-dependent kinase C; 1 |
| CRO_T032184 | AT3G04590 (9.00E-28) | AHL14|AT-hook motif nuclear localized protein 14 |
| CRO_T032707 | AT3G10150 (5.00E-136) | PAP16|purple acid phosphatase 16 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000152 | histone exchange regulation of developmental growth regulation of histone deacetylation Notch signaling pathway tryptophanyl-tRNA aminoacylation Swr1 complex proton-transporting two-sector ATPase complex, catalytic domain Golgi-associated vesicle hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc Protein_kinases_phosphatases, PPC:1.11.1: Legume Lectin Domain Kinase | details |
| TissueCFM000428 | oxidation-reduction process malate metabolic process gluconeogenesis I malate dehydrogenase (decarboxylating) (NAD+) activity FAD binding cobalt ion binding secondary metabolite biosynthetic process Ubiquitin_Proteasome_system, E3 adaptor: DWD | details |
| TissueCFM001396 | gluconeogenesis I Protein_kinases_phosphatases, PPC:2.1.3: CTR1/EDR1 Kinase Protein_kinases_phosphatases, PPC:4.5.2: CDC2 Like Kinase Family protein targeting to Golgi synaptonemal complex reciprocal meiotic recombination | details |
| TissueCFM001480 | Protein_kinases_phosphatases, PPC:1.5.3: Receptor Like Cytoplasmic Kinase IV L-tryptophan biosynthesis GMP synthase activity GMP synthase (glutamine-hydrolyzing) activity Protein_kinases_phosphatases, PPC:4.2.1: Calcium Dependent Protein Kinase GMP biosynthetic process ATP binding calmodulin-dependent protein kinase activity calcium-dependent protein serine/threonine kinase activity peptidyl-serine phosphorylation abscisic acid-activated signaling pathway protein autophosphorylation carbohydrate transport | details |
| TissueCFM001602 | Tight junction regulation of lipid metabolic process clathrin adaptor complex chloroplast mitochondrion malate metabolic process malate dehydrogenase (decarboxylating) (NAD+) activity benzoate biosynthesis I (CoA-dependent, β-oxidative) gluconeogenesis I triacylglycerol degradation cobalt ion binding intracellular protein transport oxidation-reduction process vesicle-mediated transport Endocytosis 2-alkenal reductase [NAD(P)] activity protein transporter activity protein homodimerization activity NAD binding | details |
| TissueCFM001633 | Protein_kinases_phosphatases, PPC:4.2.1: Calcium Dependent Protein Kinase intrinsic component of membrane regulation of meristem structural organization glycerophospholipid metabolic process Base excision repair Glycerophospholipid metabolism diacylglycerol and triacylglycerol biosynthesis phosphatidylcholine acyl editing phospholipid remodeling (phosphatidylcholine, yeast) protein kinase binding DNA N-glycosylase activity O-acyltransferase activity base-excision repair plasma membrane calmodulin-dependent protein kinase activity calcium-dependent protein serine/threonine kinase activity | details |
Expression profiles
 Show details about module gene expression profiling |