TreatCFM000010's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| protein targeting to vacuole | 0.005836387 | GO:0006623 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000440 | AT3G08620 (6.00E-63) | RNA-binding KH domain-containing protein |
| CRO_T002102 | - | - |
| CRO_T003046 | AT4G35870 (0) | early-responsive to dehydration stress protein (ERD4) |
| CRO_T010883 | - | - |
| CRO_T016198 | - | - |
| CRO_T018278 | - | - |
| CRO_T023385 | - | - |
| CRO_T025755 | - | - |
| CRO_T026690 | - | - |
| CRO_T027994 | - | - |
| CRO_T029407 | AT4G24330 (1.00E-165) | Protein of unknown function (DUF1682) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000001 | details | |
| TreatCFM000048 | details | |
| TreatCFM000137 | membrane coat | details |
| TreatCFM000299 | L-tyrosine biosynthesis II Mannose type O-glycan biosyntheis Other types of O-glycan biosynthesis tyrosine biosynthetic process histone exchange regulation of nitric-oxide synthase activity | details |
| TreatCFM000479 | Ubiquitin_Proteasome_system, DUB: USP protein secretion protein deubiquitination | details |
| TreatCFM000571 | regulation of transcription, DNA-templated Transcription_related, Transcription factor: C2C2-GATA Transcription_related, Transcription factor: M-type | details |
| TreatCFM000696 | 3-phosphoinositide biosynthesis endoplasmic reticulum tubular network organization clathrin-mediated endocytosis plant-type cell wall modification involved in multidimensional cell growth hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc D-myo-inositol (1,4,5)-trisphosphate biosynthesis D-myo-inositol (1,4,5)-trisphosphate degradation apical plasma membrane endoplasmic reticulum tubular network phosphatidylinositol dephosphorylation calcium ion transmembrane transport cell wall biogenesis xyloglucan metabolic process phosphatidylinositol phosphorylation calcium-transporting ATPase activity cation binding 1-phosphatidylinositol-4-phosphate 5-kinase activity hydrolase activity Fanconi anemia pathway Inositol phosphate metabolism pollen tube | details |
| TreatCFM000851 | AP-5 adaptor complex Protein_kinases_phosphatases, PPC:1.13.4: Leucine Rich Repeat Kinase III | details |
| TreatCFM001119 | spindle pole microtubule organizing center GTP biosynthetic process CTP biosynthetic process regulation of Rho protein signal transduction nucleoside diphosphate phosphorylation microtubule nucleation pyrimidine ribonucleotide salvage UTP biosynthetic process pyrimidine ribonucleoside biosynthetic process pyrimidine nucleoside salvage pyrimidine nucleobase metabolic process adenosine deoxyribonucleotides de novo biosynthesis CMP phosphorylation guanosine deoxyribonucleotides de novo biosynthesis I guanosine ribonucleotides de novo biosynthesis purine deoxyribonucleosides salvage pyrimidine deoxyribonucleotide phosphorylation pyrimidine deoxyribonucleotides de novo biosynthesis II pyrimidine nucleobases salvage I pyrimidine ribonucleosides salvage I superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) superpathway of pyrimidine nucleobases salvage superpathway of pyrimidine ribonucleosides salvage pyrimidine salvage pathway UTP and CTP de novo biosynthesis pyrimidine deoxyribonucleotides de novo biosynthesis I gamma-tubulin binding protein-cysteine S-palmitoyltransferase activity uridine kinase activity Rho guanyl-nucleotide exchange factor activity nucleoside diphosphate kinase activity exocyst Insulin signaling pathway Pyrimidine metabolism exocytosis positive regulation of GTPase activity pyrimidine ribonucleotides interconversion | details |
| TreatCFM001813 | cellular potassium ion homeostasis abscisic acid-activated signaling pathway involved in stomatal movement NF-kappa B signaling pathway sulfonylurea receptor activity G-protein coupled receptor signaling pathway G-protein beta/gamma-subunit complex binding Protein_kinases_phosphatases, PPC:1.1.3: Putative protein kinase/Putative receptor-like protein kinase Ubiquitin_Proteasome_system, DUB: USP plant-type vacuole response to salt stress signal transducer activity | details |
| TreatCFM001842 | Plant-pathogen interaction Protein_kinases_phosphatases, PPC:4.2.1: Calcium Dependent Protein Kinase Transcription_related, Transcription factor: SBP steroid hormone mediated signaling pathway voltage-gated potassium channel activity calmodulin-dependent protein kinase activity calcium-dependent protein serine/threonine kinase activity protein targeting to vacuole regulation of membrane potential potassium ion transmembrane transport vegetative to reproductive phase transition of meristem protein autophosphorylation abscisic acid-activated signaling pathway peptidyl-serine phosphorylation calmodulin binding | details |
| TreatCFM001955 | Alcoholism H4 histone acetyltransferase activity chromosome, telomeric region chromatin silencing at telomere regulation of leaf development Circadian rhythm histone acetylation nuclear chromatin histone binding Transcription_related, Transcription factor: TCP | details |
Expression profiles
 Show details about module gene expression profiling |