TreatCFM001119's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| spindle pole | 0.003542196 | GO:0000922 |
| microtubule organizing center | 0.003542196 | GO:0005815 |
| GTP biosynthetic process | 0.00481324 | GO:0006183 |
| CTP biosynthetic process | 0.00481324 | GO:0006241 |
| regulation of Rho protein signal transduction | 0.00481324 | GO:0035023 |
| nucleoside diphosphate phosphorylation | 0.00481324 | GO:0006165 |
| microtubule nucleation | 0.00481324 | GO:0007020 |
| pyrimidine ribonucleotide salvage | 0.00481324 | GO:0010138 |
| UTP biosynthetic process | 0.00481324 | GO:0006228 |
| pyrimidine ribonucleoside biosynthetic process | 0.00481324 | GO:0046132 |
| pyrimidine nucleoside salvage | 0.005988748 | GO:0043097 |
| pyrimidine nucleobase metabolic process | 0.006159309 | GO:0006206 |
| adenosine deoxyribonucleotides de novo biosynthesis | 0.012110146 | plantCyc |
| CMP phosphorylation | 0.012110146 | plantCyc |
| guanosine deoxyribonucleotides de novo biosynthesis I | 0.012110146 | plantCyc |
| guanosine ribonucleotides de novo biosynthesis | 0.012110146 | plantCyc |
| purine deoxyribonucleosides salvage | 0.012110146 | plantCyc |
| pyrimidine deoxyribonucleotide phosphorylation | 0.012110146 | plantCyc |
| pyrimidine deoxyribonucleotides de novo biosynthesis II | 0.012110146 | plantCyc |
| pyrimidine nucleobases salvage I | 0.012110146 | plantCyc |
| pyrimidine ribonucleosides salvage I | 0.012110146 | plantCyc |
| superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) | 0.012110146 | plantCyc |
| superpathway of pyrimidine nucleobases salvage | 0.012110146 | plantCyc |
| superpathway of pyrimidine ribonucleosides salvage | 0.012110146 | plantCyc |
| pyrimidine salvage pathway | 0.012772141 | plantCyc |
| UTP and CTP de novo biosynthesis | 0.012772141 | plantCyc |
| pyrimidine deoxyribonucleotides de novo biosynthesis I | 0.014152026 | plantCyc |
| gamma-tubulin binding | 0.015782354 | GO:0043015 |
| protein-cysteine S-palmitoyltransferase activity | 0.015782354 | GO:0019706 |
| uridine kinase activity | 0.015782354 | GO:0004849 |
| Rho guanyl-nucleotide exchange factor activity | 0.015782354 | GO:0005089 |
| nucleoside diphosphate kinase activity | 0.015782354 | GO:0004550 |
| exocyst | 0.018856571 | GO:0000145 |
| Insulin signaling pathway | 0.019852293 | KEGG pathway |
| Pyrimidine metabolism | 0.019852293 | KEGG pathway |
| exocytosis | 0.027222023 | GO:0006887 |
| positive regulation of GTPase activity | 0.027503104 | GO:0043547 |
| pyrimidine ribonucleotides interconversion | 0.030656779 | plantCyc |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T001038 | AT5G14710 (1.00E-44) | |
| CRO_T005332 | AT5G03540 (0) | ATEXO70A1|exocyst subunit exo70 family protein A1 |
| CRO_T020409 | AT3G27440 (3.00E-162) | UKL5|uridine kinase-like 5 |
| CRO_T025463 | AT1G35750 (2.00E-19) | APUM10|pumilio 10 |
| CRO_T025673 | AT1G17410 (1.00E-18) | Nucleoside diphosphate kinase family protein |
| CRO_T027010 | AT5G41060 (9.00E-18) | DHHC-type zinc finger family protein |
| CRO_T029407 | AT4G24330 (1.00E-165) | Protein of unknown function (DUF1682) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000010 | protein targeting to vacuole | details |
| TreatCFM001606 | pyrimidine nucleobases salvage I superpathway of pyrimidine nucleobases salvage superpathway of pyrimidine ribonucleosides salvage nuclear pore central transport channel pentose phosphate pathway (oxidative branch) I pyrimidine ribonucleosides salvage I vesicle organization pyrimidine ribonucleoside biosynthetic process protein targeting to nuclear inner membrane pyrimidine ribonucleotide salvage pyrimidine salvage pathway nuclear pore organization pyrimidine nucleobase metabolic process pyrimidine nucleoside salvage NLS-bearing protein import into nucleus pentose-phosphate shunt glucose metabolic process nucleocytoplasmic transporter activity glucose-6-phosphate dehydrogenase activity structural constituent of nuclear pore uridine kinase activity Endocytosis phosphatidylinositol binding extrinsic component of membrane NADP binding Pyrimidine metabolism | details |
| TreatCFM001813 | cellular potassium ion homeostasis abscisic acid-activated signaling pathway involved in stomatal movement NF-kappa B signaling pathway sulfonylurea receptor activity G-protein coupled receptor signaling pathway G-protein beta/gamma-subunit complex binding Protein_kinases_phosphatases, PPC:1.1.3: Putative protein kinase/Putative receptor-like protein kinase Ubiquitin_Proteasome_system, DUB: USP plant-type vacuole response to salt stress signal transducer activity | details |
| TreatCFM001955 | Alcoholism H4 histone acetyltransferase activity chromosome, telomeric region chromatin silencing at telomere regulation of leaf development Circadian rhythm histone acetylation nuclear chromatin histone binding Transcription_related, Transcription factor: TCP | details |
Expression profiles
 Show details about module gene expression profiling |