TreatCFM001955's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Alcoholism | 0.000354636 | KEGG pathway |
| H4 histone acetyltransferase activity | 0.001950499 | GO:0010485 |
| chromosome, telomeric region | 0.002925532 | GO:0000781 |
| chromatin silencing at telomere | 0.002955301 | GO:0006348 |
| regulation of leaf development | 0.004430659 | GO:2000024 |
| Circadian rhythm | 0.004430659 | KEGG pathway |
| histone acetylation | 0.007010029 | GO:0016573 |
| nuclear chromatin | 0.008766873 | GO:0000790 |
| histone binding | 0.010225752 | GO:0042393 |
| Transcription_related, Transcription factor: TCP | 0.014866131 | TF family |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T014377 | AT3G28410 (6.00E-16) | F-box/RNI-like superfamily protein |
| CRO_T024174 | AT3G58110 (8.00E-05) | unknown protein |
| CRO_T025001 | AT5G03160 (1.00E-14) | ATP58IPK|homolog of mamallian P58IPK |
| CRO_T027999 | AT5G56740 (6.00E-141) | HAG2|histone acetyltransferase of the GNAT family 2 |
| CRO_T028914 | AT5G23280 (2.00E-23) | TCP family transcription factor |
| CRO_T029407 | AT4G24330 (1.00E-165) | Protein of unknown function (DUF1682) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000010 | protein targeting to vacuole | details |
| TreatCFM001119 | spindle pole microtubule organizing center GTP biosynthetic process CTP biosynthetic process regulation of Rho protein signal transduction nucleoside diphosphate phosphorylation microtubule nucleation pyrimidine ribonucleotide salvage UTP biosynthetic process pyrimidine ribonucleoside biosynthetic process pyrimidine nucleoside salvage pyrimidine nucleobase metabolic process adenosine deoxyribonucleotides de novo biosynthesis CMP phosphorylation guanosine deoxyribonucleotides de novo biosynthesis I guanosine ribonucleotides de novo biosynthesis purine deoxyribonucleosides salvage pyrimidine deoxyribonucleotide phosphorylation pyrimidine deoxyribonucleotides de novo biosynthesis II pyrimidine nucleobases salvage I pyrimidine ribonucleosides salvage I superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) superpathway of pyrimidine nucleobases salvage superpathway of pyrimidine ribonucleosides salvage pyrimidine salvage pathway UTP and CTP de novo biosynthesis pyrimidine deoxyribonucleotides de novo biosynthesis I gamma-tubulin binding protein-cysteine S-palmitoyltransferase activity uridine kinase activity Rho guanyl-nucleotide exchange factor activity nucleoside diphosphate kinase activity exocyst Insulin signaling pathway Pyrimidine metabolism exocytosis positive regulation of GTPase activity pyrimidine ribonucleotides interconversion | details |
| TreatCFM001813 | cellular potassium ion homeostasis abscisic acid-activated signaling pathway involved in stomatal movement NF-kappa B signaling pathway sulfonylurea receptor activity G-protein coupled receptor signaling pathway G-protein beta/gamma-subunit complex binding Protein_kinases_phosphatases, PPC:1.1.3: Putative protein kinase/Putative receptor-like protein kinase Ubiquitin_Proteasome_system, DUB: USP plant-type vacuole response to salt stress signal transducer activity | details |
Expression profiles
 Show details about module gene expression profiling |