TreatCFM000037's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Transcription_related, Transcription factor: LOB | 0.005838109 | TF family |
| mitochondrial transport | 0.007386615 | GO:0006839 |
| 90S preribosome | 0.012137316 | GO:0030686 |
| mitochondrial membrane | 0.012137316 | GO:0031966 |
| translational elongation | 0.016216968 | GO:0006414 |
| maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 0.016216968 | GO:0000462 |
| small-subunit processome | 0.038976441 | GO:0032040 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T003036 | AT5G15780 (9.00E-21) | Pollen Ole e 1 allergen and extensin family protein |
| CRO_T024209 | AT4G30990 (0) | ARM repeat superfamily protein |
| CRO_T025572 | - | - |
| CRO_T025655 | AT1G56070 (1.00E-17) | LOS1|LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 1 |
| CRO_T029946 | - | - |
| CRO_T032436 | AT3G54110 (1.00E-43) | ATPUMP1|PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 1; ATUCP1|UNCOUPLING PROTEIN 1 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000020 | redox enzymes that act in conjunction with CAZymes, Auxiliary Activities: AA7 | details |
| TreatCFM000074 | acetyl-CoA carboxylase complex | details |
| TreatCFM000487 | Protein_kinases_phosphatases, PPC:1.16.1: Receptor Like Cytoplasmic Kinase II xylan biosynthetic process translational elongation maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Transcription_related, Transcription factor: MYB 90S preribosome Plant hormone signal transduction | details |
| TreatCFM000494 | heptaprenyl diphosphate biosynthesis hexaprenyl diphosphate biosynthesis nonaprenyl diphosphate biosynthesis I nonaprenyl diphosphate biosynthesis II octaprenyl diphosphate biosynthesis superpathway of plastoquinol biosynthesis Transcription_related, Transcription factor: BES1 trans-octaprenyltranstransferase activity all-trans-nonaprenyl-diphosphate synthase (geranyl-diphosphate specific) activity geranylgeranyl diphosphate biosynthesis polyisoprenoid biosynthesis superpathway of geranylgeranyl diphosphate biosynthesis II (via MEP) superpathway of geranylgeranyldiphosphate biosynthesis I (via mevalonate) heptaprenyl diphosphate synthase activity 3'-5'-exoribonuclease activity N-acetyltransferase activity hydrolase activity | details |
| TreatCFM000719 | trans-octaprenyltranstransferase activity all-trans-nonaprenyl-diphosphate synthase (geranyl-diphosphate specific) activity dihydroneopterin aldolase activity heptaprenyl diphosphate synthase activity heptaprenyl diphosphate biosynthesis hexaprenyl diphosphate biosynthesis nonaprenyl diphosphate biosynthesis I nonaprenyl diphosphate biosynthesis II octaprenyl diphosphate biosynthesis superpathway of plastoquinol biosynthesis 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I folic acid biosynthetic process aminopeptidase activity tetrahydrofolate biosynthetic process polyisoprenoid biosynthesis geranylgeranyl diphosphate biosynthesis superpathway of geranylgeranyl diphosphate biosynthesis II (via MEP) superpathway of geranylgeranyldiphosphate biosynthesis I (via mevalonate) Folate biosynthesis tetrahydrofolate biosynthesis II chloroplast thylakoid lumen 90S preribosome Terpenoid backbone biosynthesis manganese ion binding isoprenoid biosynthetic process maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) small-subunit processome methyltransferase activity Photosynthesis | details |
Expression profiles
 Show details about module gene expression profiling |