TreatCFM000047's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Golgi cisterna membrane | 0.016228965 | GO:0032580 |
| Various types of N-glycan biosynthesis | 0.016228965 | KEGG pathway |
| fucosylation | 0.016843699 | GO:0036065 |
| Lewis a epitope biosynthetic process | 0.016843699 | GO:0010493 |
| formation of glycosidic bonds, GlycosylTransferases: GTnc | 0.018448544 | cazy family |
| fucosyltransferase activity | 0.040180929 | GO:0008417 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000156 | - | - |
| CRO_T001225 | - | - |
| CRO_T003504 | AT5G44380 (4.00E-20) | FAD-binding Berberine family protein |
| CRO_T003505 | - | - |
| CRO_T007024 | - | - |
| CRO_T007938 | AT3G06240 (9.00E-14) | F-box family protein |
| CRO_T008379 | AT1G10210 (0) | ATMPK1|mitogen-activated protein kinase 1 |
| CRO_T008686 | - | - |
| CRO_T008850 | - | - |
| CRO_T009929 | - | - |
| CRO_T010096 | AT1G71990 (9.00E-170) | ATFT4|ARABIDOPSIS FUCOSYLTRANSFERASE 4; FUT13|fucosyltransferase 13 |
| CRO_T010321 | - | - |
| CRO_T011585 | - | - |
| CRO_T012783 | - | - |
| CRO_T014101 | AT5G59460 (1.00E-20) | scarecrow-like transcription factor 11 (SCL11) |
| CRO_T018087 | - | - |
| CRO_T018961 | - | - |
| CRO_T023322 | AT1G77670 (7.00E-13) | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein |
| CRO_T023389 | - | - |
| CRO_T027543 | - | - |
| CRO_T028556 | - | - |
| CRO_T030006 | - | - |
| CRO_T030062 | - | - |
| CRO_T031444 | - | - |
| CRO_T033458 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000006 | details | |
| TreatCFM000009 | phytol salvage pathway | details |
| TreatCFM000014 | details | |
| TreatCFM000065 | Cytochrome_P450, Cytochrome P450: CYP724A | details |
| TreatCFM000107 | dihydroorotase activity 11-beta-hydroxysteroid dehydrogenase (NADP+) activity Protein_kinases_phosphatases, PPC:4.5.1: MAPK Family Transcription_related, Transcription factor: RWP-RK 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity pyrimidine nucleobase biosynthetic process UMP biosynthesis I detoxification of reactive carbonyls in chloroplasts traumatin and (Z)-3-hexen-1-yl acetate biosynthesis glycerol channel activity water channel activity MAP kinase activity | details |
| TreatCFM000124 | details | |
| TreatCFM000175 | lipid IVA biosynthesis mitochondrial respiratory chain AP-5 adaptor complex | details |
| TreatCFM000222 | fucosyltransferase activity formation of glycosidic bonds, GlycosylTransferases: GTnc Various types of N-glycan biosynthesis Lewis a epitope biosynthetic process fucosylation Golgi cisterna membrane protein glycosylation | details |
| TreatCFM000299 | L-tyrosine biosynthesis II Mannose type O-glycan biosyntheis Other types of O-glycan biosynthesis tyrosine biosynthetic process histone exchange regulation of nitric-oxide synthase activity | details |
| TreatCFM000376 | negative regulation of protein kinase activity cyanide biosynthetic process protein kinase inhibitor activity double-stranded RNA binding Cyanoamino acid metabolism Galactose metabolism protein kinase binding Transcription_related, Transcription factor: M-type | details |
| TreatCFM000852 | fucosyltransferase activity formation of glycosidic bonds, GlycosylTransferases: GTnc Various types of N-glycan biosynthesis fucosylation Lewis a epitope biosynthetic process Golgi cisterna membrane protein glycosylation | details |
| TreatCFM000869 | fucosyltransferase activity Various types of N-glycan biosynthesis formation of glycosidic bonds, GlycosylTransferases: GTnc Lewis a epitope biosynthetic process fucosylation Ubiquitin_Proteasome_system, DUB: JAMM COP9 signalosome Golgi cisterna membrane cullin deneddylation protein glycosylation | details |
| TreatCFM001186 | formation of glycosidic bonds, GlycosylTransferases: GTnc Various types of N-glycan biosynthesis Lewis a epitope biosynthetic process L-methionine biosynthetic process from S-adenosylmethionine fucosylation S-methyl-5-thio-α-D-ribose 1-phosphate degradation adenosine ribonucleotides de novo biosynthesis L-methionine biosynthetic process from methylthioadenosine fucosyltransferase activity ribosomal small subunit assembly S-methyl-5-thioribose-1-phosphate isomerase activity plant-type vacuole Golgi cisterna membrane protein glycosylation Ubiquitin_Proteasome_system, E3: U-box Cysteine and methionine metabolism | details |
| TreatCFM001942 | formation of glycosidic bonds, GlycosylTransferases: GTnc Various types of N-glycan biosynthesis adenosine ribonucleotides de novo biosynthesis Lewis a epitope biosynthetic process fucosylation regulation of root morphogenesis deoxyribonucleotide biosynthetic process Golgi cisterna membrane fucosyltransferase activity ribonucleoside-diphosphate reductase complex proton-transporting ATP synthase complex, catalytic core F(1) ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor protein glycosylation ATP synthesis coupled proton transport cell wall organization or biogenesis DNA replication proton-transporting ATP synthase activity, rotational mechanism proton-transporting ATPase activity, rotational mechanism O-acetyltransferase activity | details |
| TreatCFM002133 | Various types of N-glycan biosynthesis formation of glycosidic bonds, GlycosylTransferases: GTnc Lewis a epitope biosynthetic process fucosylation xylogalacturonan biosynthesis Insulin signaling pathway Golgi cisterna membrane fucosyltransferase activity exocyst protein glycosylation exocytosis Ubiquitin_Proteasome_system, E3: U-box | details |
Expression profiles
 Show details about module gene expression profiling |