TreatCFM000055's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc | 0.006820192 | cazy family |
| homogalacturonan biosynthesis | 0.00712915 | plantCyc |
| formation of glycosidic bonds, GlycosylTransferases: GTnc | 0.017462687 | cazy family |
| polygalacturonate 4-alpha-galacturonosyltransferase activity | 0.041219514 | GO:0047262 |
| sucrose alpha-glucosidase activity | 0.041219514 | GO:0004575 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T001136 | AT1G05240 (9.00E-66) | Peroxidase superfamily protein |
| CRO_T005816 | AT1G06780 (2.00E-166) | GAUT6|galacturonosyltransferase 6 |
| CRO_T007275 | AT1G03220 (5.00E-53) | Eukaryotic aspartyl protease family protein |
| CRO_T008793 | - | - |
| CRO_T009801 | - | - |
| CRO_T014992 | - | - |
| CRO_T016652 | AT1G15960 (0) | NRAMP6|NRAMP metal ion transporter 6 |
| CRO_T017383 | AT3G02700 (1.00E-82) | NC domain-containing protein-related |
| CRO_T021269 | AT1G78830 (3.00E-62) | Curculin-like (mannose-binding) lectin family protein |
| CRO_T030943 | - | - |
| CRO_T031716 | AT3G13790 (0) | ATCWINV1|CELL WALL INVERTASE 1 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000014 | details | |
| TreatCFM000059 | Amino sugar and nucleotide sugar metabolism cell wall macromolecule catabolic process chitinase activity chitin binding chitin catabolic process homogalacturonan biosynthesis | details |
| TreatCFM000066 | Protein processing in endoplasmic reticulum endoplasmic reticulum lumen unfolded protein binding protein folding endoplasmic reticulum calcium ion binding dolichyl-phosphate-mannose-protein mannosyltransferase complex mitochondrial respiratory chain L-arginine degradation I (arginase pathway) L-arginine degradation VI (arginase 2 pathway) L-Nδ-acetylornithine biosynthesis urea cycle arginase activity chain elongation of O-linked mannose residue pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response regulation of endoplasmic reticulum unfolded protein response positive regulation by host of viral process cell wall mannoprotein biosynthetic process hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc dolichyl-phosphate-mannose-protein mannosyltransferase activity protein O-linked mannosylation peptidyl-diphthamide biosynthetic process from peptidyl-histidine glycoprotein ERAD pathway mannosyl-oligosaccharide 1,2-alpha-mannosidase activity clathrin adaptor complex endoplasmic reticulum unfolded protein response | details |
| TreatCFM000182 | trans-zeatin biosynthesis | details |
| TreatCFM000340 | details | |
| TreatCFM000898 | adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc chitinase activity chitin binding cell wall macromolecule catabolic process chitin catabolic process Amino sugar and nucleotide sugar metabolism | details |
| TreatCFM001319 | cell wall macromolecule catabolic process chitin catabolic process chitin binding chitinase activity Amino sugar and nucleotide sugar metabolism carbohydrate metabolic process adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc Transcription_related, Transcription factor: LOB peptidase activity Transcription_related, Transcription factor: GRAS | details |
Expression profiles
 Show details about module gene expression profiling |