TreatCFM000059's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Amino sugar and nucleotide sugar metabolism | 0.000255726 | KEGG pathway |
| cell wall macromolecule catabolic process | 0.001513158 | GO:0016998 |
| chitinase activity | 0.002919401 | GO:0004568 |
| chitin binding | 0.002919401 | GO:0008061 |
| chitin catabolic process | 0.004095319 | GO:0006032 |
| homogalacturonan biosynthesis | 0.031980024 | plantCyc |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000511 | - | - |
| CRO_T000766 | - | - |
| CRO_T002457 | AT1G47960 (2.00E-05) | ATC/VIF1|CELL WALL / VACUOLAR INHIBITOR OF FRUCTOSIDASE 1 |
| CRO_T003534 | - | - |
| CRO_T004468 | AT1G50790 (3.00E-06) | Plant mobile domain protein family |
| CRO_T004902 | - | - |
| CRO_T005816 | AT1G06780 (2.00E-166) | GAUT6|galacturonosyltransferase 6 |
| CRO_T007306 | AT3G49750 (1.00E-22) | AtRLP44|receptor like protein 44 |
| CRO_T007470 | - | - |
| CRO_T007713 | AT2G43570 (5.00E-15) | CHI|chitinase, putative |
| CRO_T008584 | - | - |
| CRO_T008793 | - | - |
| CRO_T008894 | - | - |
| CRO_T009801 | - | - |
| CRO_T010179 | - | - |
| CRO_T011705 | AT2G15220 (7.00E-83) | Plant basic secretory protein (BSP) family protein |
| CRO_T012073 | - | - |
| CRO_T012805 | - | - |
| CRO_T013348 | - | - |
| CRO_T014357 | - | - |
| CRO_T014395 | - | - |
| CRO_T014761 | - | - |
| CRO_T014834 | - | - |
| CRO_T015941 | - | - |
| CRO_T016505 | - | - |
| CRO_T016531 | AT2G32670 (5.00E-87) | ATVAMP725|vesicle-associated membrane protein 725 |
| CRO_T017383 | AT3G02700 (1.00E-82) | NC domain-containing protein-related |
| CRO_T017620 | - | - |
| CRO_T018696 | - | - |
| CRO_T019586 | - | - |
| CRO_T019978 | - | - |
| CRO_T021509 | - | - |
| CRO_T022672 | - | - |
| CRO_T023139 | - | - |
| CRO_T023437 | AT4G24730 (2.00E-26) | Calcineurin-like metallo-phosphoesterase superfamily protein |
| CRO_T023507 | - | - |
| CRO_T023855 | - | - |
| CRO_T024348 | - | - |
| CRO_T025621 | AT3G54420 (1.00E-59) | ATCHITIV|CHITINASE CLASS IV; ATEP3|homolog of carrot EP3-3 chitinase |
| CRO_T026126 | AT5G51350 (1.00E-21) | MOL1|MORE LATERAL GROWTH1 |
| CRO_T029406 | - | - |
| CRO_T030024 | - | - |
| CRO_T030134 | - | - |
| CRO_T030890 | - | - |
| CRO_T030943 | - | - |
| CRO_T031341 | - | - |
| CRO_T031763 | - | - |
| CRO_T032373 | - | - |
| CRO_T033636 | - | - |
| CRO_T033774 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000014 | details | |
| TreatCFM000050 | details | |
| TreatCFM000055 | hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc homogalacturonan biosynthesis formation of glycosidic bonds, GlycosylTransferases: GTnc polygalacturonate 4-alpha-galacturonosyltransferase activity sucrose alpha-glucosidase activity | details |
| TreatCFM000066 | Protein processing in endoplasmic reticulum endoplasmic reticulum lumen unfolded protein binding protein folding endoplasmic reticulum calcium ion binding dolichyl-phosphate-mannose-protein mannosyltransferase complex mitochondrial respiratory chain L-arginine degradation I (arginase pathway) L-arginine degradation VI (arginase 2 pathway) L-Nδ-acetylornithine biosynthesis urea cycle arginase activity chain elongation of O-linked mannose residue pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response regulation of endoplasmic reticulum unfolded protein response positive regulation by host of viral process cell wall mannoprotein biosynthetic process hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc dolichyl-phosphate-mannose-protein mannosyltransferase activity protein O-linked mannosylation peptidyl-diphthamide biosynthetic process from peptidyl-histidine glycoprotein ERAD pathway mannosyl-oligosaccharide 1,2-alpha-mannosidase activity clathrin adaptor complex endoplasmic reticulum unfolded protein response | details |
| TreatCFM000117 | details | |
| TreatCFM000124 | details | |
| TreatCFM000299 | L-tyrosine biosynthesis II Mannose type O-glycan biosyntheis Other types of O-glycan biosynthesis tyrosine biosynthetic process histone exchange regulation of nitric-oxide synthase activity | details |
| TreatCFM000310 | Cyanoamino acid metabolism cyanide biosynthetic process protein methylation | details |
| TreatCFM000340 | details | |
| TreatCFM000345 | DNA-directed RNA polymerase activity Purine metabolism protein methyltransferase activity protein methylation Transcription_related, Transcription factor: HB | details |
| TreatCFM000357 | tRNA dihydrouridine synthesis mitotic spindle assembly checkpoint tRNA dihydrouridine synthase activity Cell cycle | details |
| TreatCFM000376 | negative regulation of protein kinase activity cyanide biosynthetic process protein kinase inhibitor activity double-stranded RNA binding Cyanoamino acid metabolism Galactose metabolism protein kinase binding Transcription_related, Transcription factor: M-type | details |
| TreatCFM000632 | mitochondrial respiratory chain chlorophyll catabolic process cytochrome complex assembly | details |
| TreatCFM000789 | Taurine and hypotaurine metabolism Golgi stack anaerobic respiration Golgi to plasma membrane protein transport Golgi vesicle docking detection of hypoxia peptidyl-cysteine oxidation Autophagy - yeast intra-Golgi vesicle-mediated transport SNARE complex vesicle fusion exocytosis nucleic acid phosphodiester bond hydrolysis oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen SNAP receptor activity SNARE binding endonuclease activity ATPase activity | details |
| TreatCFM000812 | details | |
| TreatCFM000852 | fucosyltransferase activity formation of glycosidic bonds, GlycosylTransferases: GTnc Various types of N-glycan biosynthesis fucosylation Lewis a epitope biosynthetic process Golgi cisterna membrane protein glycosylation | details |
| TreatCFM000898 | adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc chitinase activity chitin binding cell wall macromolecule catabolic process chitin catabolic process Amino sugar and nucleotide sugar metabolism | details |
| TreatCFM001319 | cell wall macromolecule catabolic process chitin catabolic process chitin binding chitinase activity Amino sugar and nucleotide sugar metabolism carbohydrate metabolic process adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc Transcription_related, Transcription factor: LOB peptidase activity Transcription_related, Transcription factor: GRAS | details |
| TreatCFM001509 | cell wall macromolecule catabolic process chitin binding chitinase activity chitin catabolic process Amino sugar and nucleotide sugar metabolism carbohydrate metabolic process adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc Transcription_related, Transcription factor: GRAS | details |
| TreatCFM001510 | rosmarinic acid biosynthesis I Cytochrome_P450, Cytochrome P450: CYP78A Transcription_related, Transcription factor: GRAS secondary metabolite biosynthetic process | details |
| TreatCFM001668 | helicase activity nucleic acid binding exocytosis vesicle fusion nucleic acid phosphodiester bond hydrolysis endonuclease activity SNARE binding SNAP receptor activity SNARE complex Spliceosome | details |
Expression profiles
 Show details about module gene expression profiling |