TreatCFM000103's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| trans-lycopene biosynthesis II (plants) | 0.017806202 | plantCyc |
| carotenoid isomerase activity | 0.018690388 | GO:0046608 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T001951 | - | - |
| CRO_T002581 | - | - |
| CRO_T005953 | - | - |
| CRO_T006086 | - | - |
| CRO_T006352 | AT1G06820 (0) | CCR2|CAROTENOID AND CHLOROPLAST REGULATION 2; CRTISO|carotenoid isomerase |
| CRO_T006783 | - | - |
| CRO_T009647 | - | - |
| CRO_T010242 | - | - |
| CRO_T010553 | - | - |
| CRO_T010767 | AT3G19580 (2.00E-14) | AZF2|zinc-finger protein 2 |
| CRO_T010800 | AT5G61900 (2.00E-18) | BON1|BONZAI 1; CPN1|COPINE 1 |
| CRO_T011292 | - | - |
| CRO_T013261 | - | - |
| CRO_T013359 | - | - |
| CRO_T013450 | - | - |
| CRO_T013547 | - | - |
| CRO_T016878 | - | - |
| CRO_T017220 | - | - |
| CRO_T019068 | AT4G33280 (4.00E-12) | AP2/B3-like transcriptional factor family protein |
| CRO_T019488 | AT4G00160 (1.00E-23) | F-box/RNI-like/FBD-like domains-containing protein |
| CRO_T019869 | AT5G19040 (8.00E-39) | ATIPT5|ISOPENTENYLTRANSFERASE 5 |
| CRO_T020487 | - | - |
| CRO_T021580 | - | - |
| CRO_T021598 | - | - |
| CRO_T021722 | - | - |
| CRO_T022520 | AT2G45000 (3.00E-86) | EMB2766|EMBRYO DEFECTIVE 2766; NUP62|nucleoporin 62 |
| CRO_T022664 | - | - |
| CRO_T023208 | - | - |
| CRO_T025603 | - | - |
| CRO_T025986 | - | - |
| CRO_T026267 | AT3G60670 (1.00E-22) | PLATZ transcription factor family protein |
| CRO_T026857 | - | - |
| CRO_T027060 | - | - |
| CRO_T027388 | - | - |
| CRO_T027921 | - | - |
| CRO_T029385 | ATMG00490 (6.00E-11) | ORF107C|Mitovirus RNA-dependent RNA polymerase |
| CRO_T030453 | AT2G35110 (3.00E-35) | GRL|GNARLED; NAP1|NCK-ASSOCIATED PROTEIN 1 |
| CRO_T032138 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000062 | Transcription_related, Transcription factor: PLATZ HAUS complex acetyl-CoA carboxylase complex spindle assembly fatty acid biosynthesis initiation I octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) acetyl-CoA carboxylase activity fatty acid biosynthetic process Carbon metabolism | details |
| TreatCFM000639 | Cyanoamino acid metabolism RNA polymerase II transcription factor complex | details |
| TreatCFM002126 | cytosolic large ribosomal subunit phosphate acquisition Ribosome protein kinase activator activity structural constituent of ribosome large ribosomal subunit rRNA binding Regulation of actin cytoskeleton Riboflavin metabolism positive regulation of protein kinase activity acid phosphatase activity actin filament organization multidimensional cell growth trichome morphogenesis translational elongation cytoplasmic translation preribosome, large subunit precursor positive regulation of transcription, DNA-templated dephosphorylation | details |
Expression profiles
 Show details about module gene expression profiling |