TreatCFM000062's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Transcription_related, Transcription factor: PLATZ | 0.002657217 | TF family |
| HAUS complex | 0.004873365 | GO:0070652 |
| acetyl-CoA carboxylase complex | 0.004873365 | GO:0009317 |
| spindle assembly | 0.005316398 | GO:0051225 |
| fatty acid biosynthesis initiation I | 0.005577683 | plantCyc |
| octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) | 0.005577683 | plantCyc |
| acetyl-CoA carboxylase activity | 0.011694348 | GO:0003989 |
| fatty acid biosynthetic process | 0.017735092 | GO:0006633 |
| Carbon metabolism | 0.047108101 | KEGG pathway |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T002581 | - | - |
| CRO_T013444 | AT2G38040 (0) | CAC3|acetyl Co-enzyme a carboxylase carboxyltransferase alpha subunit |
| CRO_T019242 | - | - |
| CRO_T020367 | AT2G38540 (2.00E-10) | ATLTP1|LIPID TRANSFER PROTEIN 1 |
| CRO_T026267 | AT3G60670 (1.00E-22) | PLATZ transcription factor family protein |
| CRO_T028586 | AT5G40740 (0) | 6-Aug|augmin subunit 6 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000103 | trans-lycopene biosynthesis II (plants) carotenoid isomerase activity | details |
| TreatCFM000424 | HAUS complex phosphatidylinositol phosphate kinase activity geraniol dehydrogenase activity sinapyl alcohol dehydrogenase activity cinnamyl-alcohol dehydrogenase activity receptor signaling protein serine/threonine kinase activity spindle assembly phosphatidylinositol phosphorylation 3-phosphoinositide biosynthesis Phenylpropanoid biosynthesis Inositol phosphate metabolism MAPK signaling pathway - plant | details |
| TreatCFM000452 | fatty acid biosynthesis initiation I octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) acetyl-CoA carboxylase activity acetyl-CoA carboxylase complex fatty acid biosynthetic process Carbon metabolism | details |
| TreatCFM000641 | Ubiquitin_Proteasome_system, E3 adaptor: DWD acetyl-CoA carboxylase complex HAUS complex ureidoglycolate hydrolase activity spindle assembly fatty acid biosynthesis initiation I octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) acetyl-CoA carboxylase activity fatty acid biosynthetic process | details |
| TreatCFM001148 | Carbon metabolism fatty acid biosynthesis initiation I L-cysteine biosynthesis I octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) acetyl-CoA carboxylase activity cysteine synthase activity transferase activity U2-type spliceosomal complex U12-type spliceosomal complex acetyl-CoA carboxylase complex vacuolar proton-transporting V-type ATPase, V0 domain U2 snRNP precatalytic spliceosome cysteine biosynthetic process from serine vacuolar acidification ATP hydrolysis coupled proton transport cellular amino acid biosynthetic process catalytic step 2 spliceosome mRNA splicing, via spliceosome proton-transporting ATPase activity, rotational mechanism fatty acid biosynthetic process formation of glycosidic bonds, GlycosylTransferases: GTnc | details |
| TreatCFM001340 | Prp19 complex acetyl-CoA carboxylase complex prespliceosome catalytic step 1 spliceosome post-mRNA release spliceosomal complex leucine catabolic process fatty acid biosynthesis initiation I gibberellin biosynthesis I (non C-3, non C-13 hydroxylation) gibberellin biosynthesis III (early C-13 hydroxylation) octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) scopoletin biosynthesis umbelliferone biosynthesis catalytic step 2 spliceosome acetyl-CoA carboxylase activity iron-sulfur cluster binding mRNA splicing, via spliceosome fatty acid biosynthetic process oxidation-reduction process | details |
| TreatCFM002013 | mitochondrial inner membrane presequence translocase complex integral component of mitochondrial inner membrane acetyl-CoA carboxylase complex Ubiquitin_Proteasome_system, DUB: USP fatty acid biosynthesis initiation I octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) protein import into chloroplast stroma protein import into mitochondrial matrix protein channel activity acetyl-CoA carboxylase activity single-organism process fatty acid biosynthetic process Carbon metabolism | details |
Expression profiles
 Show details about module gene expression profiling |