TreatCFM000230's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Golgi membrane | 0.011296492 | GO:0000139 |
| protein glycosylation | 0.016984843 | GO:0006486 |
| galactosyltransferase activity | 0.018506477 | GO:0008378 |
| formation of glycosidic bonds, GlycosylTransferases: GTnc | 0.0194503 | cazy family |
| Protein_kinases_phosphatases, PPC:2.1.4: GmPK6/AtMRK1 Family | 0.0194503 | kinase family |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T013561 | AT3G06640 (7.00E-27) | PAS domain-containing protein tyrosine kinase family protein |
| CRO_T014308 | AT3G50160 (7.00E-36) | Plant protein of unknown function (DUF247) |
| CRO_T015965 | - | - |
| CRO_T023299 | AT5G12310 (2.00E-42) | RING/U-box superfamily protein |
| CRO_T028132 | AT4G32120 (7.00E-30) | Galactosyltransferase family protein |
| CRO_T031886 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000001 | details | |
| TreatCFM000004 | Transcription_related, Transcription factor: MYB | details |
| TreatCFM000009 | phytol salvage pathway | details |
| TreatCFM000017 | Oxidative phosphorylation mitochondrion NADH dehydrogenase (ubiquinone) activity mitochondrial inner membrane heme transporter activity heme transport cytochrome-c oxidase activity respiratory chain cytochrome complex assembly hydrogen ion transmembrane transport ATP synthesis coupled electron transport heme binding aerobic respiration hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances aerobic electron transport chain electron transport chain generation of precursor metabolites and energy ATP synthesis coupled proton transport mitochondrial electron transport, NADH to ubiquinone hydrogen ion transmembrane transporter activity quinone binding photosynthetic electron transport in photosystem II succinate dehydrogenase activity electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity succinate dehydrogenase complex | details |
| TreatCFM000043 | SNARE interactions in vesicular transport nickel cation binding exocytosis ATP synthesis coupled electron transport vesicle fusion nitrogen compound metabolic process SNAP receptor activity SNARE binding NADH dehydrogenase (ubiquinone) activity | details |
| TreatCFM000044 | details | |
| TreatCFM000067 | Folate biosynthesis | details |
| TreatCFM000077 | leucine metabolic process valine metabolic process L-valine biosynthesis acetolactate synthase activity branched-chain amino acid biosynthetic process 2-Oxocarboxylic acid metabolism amino acid binding | details |
| TreatCFM000182 | trans-zeatin biosynthesis | details |
| TreatCFM000357 | tRNA dihydrouridine synthesis mitotic spindle assembly checkpoint tRNA dihydrouridine synthase activity Cell cycle | details |
| TreatCFM000373 | tRNA (guanine-N2-)-methyltransferase activity tRNA N2-guanine methylation ELL-EAF complex THO complex part of transcription export complex chromosome, telomeric region nucleoplasmic THO complex epsilon DNA polymerase complex hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc Protein_kinases_phosphatases, PPC:2.1.3: CTR1/EDR1 Kinase tRNA methyltransferase complex | details |
| TreatCFM000695 | Focal adhesion phosphorylation RNA (guanine-N7)-methylation tRNA methyltransferase complex myosin complex Protein_kinases_phosphatases, PPC:2.1.2: Ankyrin Repeat Domain Kinase kinase activity tRNA (guanine-N7-)-methyltransferase activity DNA topoisomerase type I activity motor activity actin binding Calvin-Benson-Bassham cycle gluconeogenesis I glycolysis I (from glucose 6-phosphate) glycolysis IV (plant cytosol) sucrose biosynthesis I (from photosynthesis) Homologous recombination | details |
| TreatCFM000785 | mitotic spindle assembly checkpoint Oxidative phosphorylation | details |
Expression profiles
 Show details about module gene expression profiling |