TreatCFM000240's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| leucine catabolic process | 0.01352653 | GO:0006552 |
| chlorophyll catabolic process | 0.01352653 | GO:0015996 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000197 | AT5G43430 (5.00E-80) | ETFBETA|electron transfer flavoprotein beta |
| CRO_T000764 | - | - |
| CRO_T008435 | AT3G17830 (8.00E-14) | DJA4|DNA J protein A4 |
| CRO_T011720 | AT1G12880 (1.00E-31) | atnudt12|nudix hydrolase homolog 12 |
| CRO_T016223 | AT1G58400 (3.00E-73) | Disease resistance protein (CC-NBS-LRR class) family |
| CRO_T016665 | AT4G25660 (3.00E-12) | PPPDE putative thiol peptidase family protein |
| CRO_T017670 | AT2G32235 (2.00E-09) | unknown protein |
| CRO_T019090 | - | - |
| CRO_T025648 | AT4G00467 (4.00E-16) | Calcium-dependent lipid-binding (CaLB domain) family protein |
| CRO_T028922 | AT3G45940 (2.00E-19) | Glycosyl hydrolases family 31 protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000261 | seleno-amino acid detoxification and volatilization III S-methyl-L-methionine cycle L-methionine biosynthesis II Cysteine and methionine metabolism S-adenosylmethionine-homocysteine S-methyltransferase activity DNA catabolic process methionine biosynthetic process formation of glycosidic bonds, GlycosylTransferases: GTnc | details |
| TreatCFM000262 | dolichol metabolic process UDP-N-acetylglucosamine metabolic process protein N-glycosylation (eukaryotic, high mannose) phospho-N-acetylmuramoyl-pentapeptide-transferase activity UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity protein N-linked glycosylation N-Glycan biosynthesis transaminase activity | details |
| TreatCFM000890 | UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity phospho-N-acetylmuramoyl-pentapeptide-transferase activity UDP-N-acetylglucosamine metabolic process dolichol metabolic process primary shoot apical meristem specification acyl-CoA hydrolysis fructose 2,6-bisphosphate biosynthesis protein N-linked glycosylation regulation of transcription, DNA-templated phosphatase activity protein N-glycosylation (eukaryotic, high mannose) cutin biosynthesis sporopollenin precursors biosynthesis suberin monomers biosynthesis N-Glycan biosynthesis organic cyclic compound binding heterocyclic compound binding protein binding Ubiquitin_Proteasome_system, E3 adaptor: DWD RNA transport | details |
| TreatCFM001357 | chlorophyll catabolic process leucine catabolic process calcium ion transmembrane transport chloroplast inner membrane calcium-transporting ATPase activity | details |
| TreatCFM001769 | glycosaminoglycan biosynthetic process heme a biosynthetic process heparan sulfate proteoglycan biosynthetic process respiratory chain complex IV assembly formation of glycosidic bonds, GlycosylTransferases: GTnc Protein_kinases_phosphatases, PPC:4.4.1: Unknown Function Kinase oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor oxidoreductase activity, acting on the CH-CH group of donors ADP binding cytochrome-c oxidase activity | details |
Expression profiles
 Show details about module gene expression profiling |